Roseobacter denitrificans: RD1_1615
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Entry
RD1_1615 CDS
T00376
Symbol
sucC
Name
(GenBank) succinyl-CoA synthase, beta subunit
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00020
Citrate cycle (TCA cycle)
rde00640
Propanoate metabolism
rde00660
C5-Branched dibasic acid metabolism
rde01100
Metabolic pathways
rde01110
Biosynthesis of secondary metabolites
rde01120
Microbial metabolism in diverse environments
rde01200
Carbon metabolism
Module
rde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rde_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RD1_1615 (sucC)
00640 Propanoate metabolism
RD1_1615 (sucC)
00660 C5-Branched dibasic acid metabolism
RD1_1615 (sucC)
Enzymes [BR:
rde01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
RD1_1615 (sucC)
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Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ABG31242
RoseoBase:
RD1_1615
UniProt:
Q169V1
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All DBs
Position
complement(1557984..1559177)
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AA seq
397 aa
AA seq
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MNIHEYQAKALLRSYGAPVSDGRVVLKAEDAKTAAGELDGPLWVVKAQIHAGGRGKGSFK
EADAGEKGGVRLTKSVAEAAEEAKKMLGRTLVTHQTGPAGKQVNRIYIEDGSGIETELYL
ALLVDRQTSRVSFVCSTEGGMDIEEVAASTPEKILSFSVDPASGYQAFHGRRIAFALGLE
GKQVKQCVGLMGLLYTAFMEKDMEMLEINPLIVTNTGDLKVLDAKVAFDGNAIYRHADIS
ELRDTTEEDSKELEASKYDLNYIALDGEIGCMVNGAGLAMATMDIIKLYGAEPANFLDVG
GGATKEKVTEAFKIITSDPQVKGILVNIFGGIMRCDVIAEGVVAAVKEVGLKVPLVVRLE
GTNVQQGKDIINNSGLDVIAADDLKDGAQKIVKAVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccacgaataccaagccaaagccctcctccgcagctatggcgcaccggtctcc
gacgggcgggtcgtgctcaaggccgaagacgccaagacggcagcaggagagcttgatggt
ccgttgtgggtagttaaagcgcaaattcatgcgggcggtcgcggcaagggatcgttcaag
gaagccgacgccggtgaaaaaggtggcgtgcgcctgaccaaatccgtggcagaggcggcg
gaagaagccaagaaaatgctcggccgcacattggtgacgcatcagacaggccccgcaggc
aaacaagtcaatcgcatctacatcgaagatgggtcagggattgaaaccgaactctacctc
gcgcttttggtggaccgccaaaccagccgcgtcagctttgtctgctcaaccgagggcggc
atggacatcgaagaggtcgccgcttcaacgccggaaaaaatcctgtctttctccgtggat
cccgcgtccggctatcaggcgtttcacgggcgtcgcatcgcctttgcgctcggccttgag
ggcaagcaggtcaagcaatgcgtgggcctgatgggcctgctttataccgcgttcatggaa
aaagacatggaaatgctggaaatcaacccgctgatcgtcaccaataccggcgatctcaag
gtgcttgatgccaaggtggcttttgacggcaatgccatctaccgccatgccgacatttcc
gaactgcgcgacacgaccgaggaagacagcaaggagttggaagcctccaaatacgatctc
aactatatcgcgctggatggtgaaatcggctgcatggtgaacggcgcggggctggcgatg
gcgacaatggacatcatcaagctctatggcgcggaacctgcgaatttcctcgatgtgggc
ggtggtgcaaccaaggaaaaggtcaccgaagcgttcaagatcatcacttccgatccgcag
gtcaaaggtattctggtcaacatcttcggcggcattatgcgctgcgatgtaatcgccgag
ggcgtcgtcgctgcggtgaaagaagtcggcctgaaagtgccgcttgtggtgcgcctcgaa
gggacgaacgtgcaacagggcaaggacatcatcaacaactccggcctcgatgtcatcgcc
gccgatgacctcaaggacggtgcccagaaaattgtgaaagcggttaaaggttga
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