KEGG   Roseobacter denitrificans: RD1_2116
Entry
RD1_2116          CDS       T00376                                 
Name
(GenBank) type II/IV secretion system protein, putative
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
rde  Roseobacter denitrificans
Pathway
rde02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rde00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RD1_2116
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rde02044]
    RD1_2116
   02035 Bacterial motility proteins [BR:rde02035]
    RD1_2116
Enzymes [BR:rde01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RD1_2116
Secretion system [BR:rde02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   RD1_2116
Bacterial motility proteins [BR:rde02035]
 Pilus system
  Pilus assembly proteins
   RD1_2116
SSDB
Motif
Pfam: T2SSE DEAD Microtub_bd AAA_2 FtsK_SpoIIIE ABC_tran AAA_19 AAA_16 AAA_22 AAA_28 AAA_7 CbiA Zeta_toxin AAA_29 AAA_30 ResIII AAA_23 ATP_bind_1 cobW KAP_NTPase nSTAND3 Pox_A32
Other DBs
NCBI-ProteinID: ABG31714
RoseoBase: RD1_2116
UniProt: Q167X9
LinkDB
Position
complement(2018544..2020001)
AA seq 485 aa
MFSKYKKAKGATPVASGALAQQAGSGDPANAPVQNVMRKAAQPAPAQAAAMDKERKRKER
MGEIKLDLHHVLLDNLNLAALEHATEQDLRQEISAITSEHLQAQSIVLNREDRQTLTSEL
YDEVTGLGPLETLLKDDSVNDILVNGPQQIFVERDGKLQLTDVMFKDERHLLRIIDKIVS
AVGRRVDESNPYVDARLKDGSRFNAMVPPVAVDGSLVSIRKFKKDKLGIDDLVHFGAFTE
EMAAYLQAAVATRLNIIVSGGTGSGKTTTLNALSSFIDNSERILTIEDTAELQLQQTHVG
RMESRPPNVEGKGEVSPRDCLKNALRMRPDRIIVGETRGEEVIDMLQAMNTGHDGSMTTI
HANSARDGVSRLENMIAMAGIEMPLKAVRSQIASAVNLIVQASRLQDGSRRMTSITEVTG
MEGEVISMQEIFRYQRVGLTPENKIIGHYTATGVRSAYAERFRMWGYDLPASIYEPTAAP
QGFST
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgttctcgaagtacaagaaggcaaagggcgcgacacccgtcgcgtcaggcgctctggcc
cagcaagctggatccggcgatcctgccaatgcgccggtgcaaaatgtcatgcgcaaggcg
gcgcaacccgccccggcacaggccgcggccatggacaaggaacgcaaacgcaaggagcgg
atgggcgagatcaagctggacctgcatcacgtgctgctcgacaacctcaatcttgcggca
cttgaacatgcgaccgaacaggatttgcgtcaggaaatcagcgccatcaccagcgagcat
ctgcaagcccagagcatcgttctcaaccgcgaagaccgccagacgctgacatccgaactc
tatgatgaggtcacagggctcggtccgcttgagacgcttttgaaagacgactcggtcaac
gatattttggtcaacgggccgcagcagatattcgtggaacgggatggcaaactgcaactc
acggatgtgatgttcaaggatgaacgccatctgctacgcattatcgacaagatcgtctcg
gccgtcgggcggcgcgtcgatgaaagcaacccctacgtcgatgcccgcctcaaggacggg
tcgcggtttaacgccatggtgccccccgtggccgtggacggcagcctcgtgtcgatccgg
aaattcaagaaagacaagctgggcattgatgatctggtgcatttcggcgcctttaccgaa
gagatggccgcctatctgcaggcggctgtggcgacgcgcctcaacatcattgtttcgggc
gggacaggctcgggcaagaccacaaccctgaacgccctgtcgtccttcatcgacaactcg
gagcgtatcctgaccatcgaggacacggcggaactgcaattgcagcagacacacgtgggc
cgcatggaaagccgaccgcccaacgtggagggcaagggcgaagtttccccccgtgactgc
ctcaagaacgcgctgcggatgcggcctgatcgcatcatcgtgggcgagacgcgtggcgag
gaagtgattgacatgctgcaggcgatgaacacgggtcacgatggatcaatgacgacaatc
cacgcgaattcggcgcgcgacggggtgtctcgtctggaaaacatgatcgccatggcgggg
attgaaatgccgctcaaggcggtgcgcagtcagatcgcctcggcggtgaacctgattgtt
caggcctcgcgcctgcaggatggctcacgccgcatgacctcgatcaccgaggtcacgggg
atggagggtgaagtcatctcgatgcaggagattttccgctaccagcgcgtgggtctcaca
ccggaaaacaagatcatcggccactacacggccacgggtgtgcgcagcgcctatgccgaa
cgcttccgtatgtggggctacgatttgccggcttccatctatgaacccaccgcagccccg
caagggttttcaacgtga

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