Roseobacter denitrificans: RD1_3084
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Entry
RD1_3084 CDS
T00376
Name
(GenBank) conserved hypothetical protein
KO
K01820
L-rhamnose isomerase / sugar isomerase [EC:
5.3.1.14
5.3.1.-]
Organism
rde
Roseobacter denitrificans
Pathway
rde00040
Pentose and glucuronate interconversions
rde00051
Fructose and mannose metabolism
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RD1_3084
00051 Fructose and mannose metabolism
RD1_3084
Enzymes [BR:
rde01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.14 L-rhamnose isomerase
RD1_3084
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Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ABG32594
RoseoBase:
RD1_3084
UniProt:
Q164J9
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Position
2956384..2957658
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AA seq
424 aa
AA seq
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MIHSDIIAQTNETAMAKLLADYDALGAQLERRGIDIAAIKDRVANYGVAVPSWGVGTGGT
RFARFPGPGEPHDIFDKLDDCGLIHQLTRATPSVSLHIPWDAQPAADLNSKAEEVGLRFD
AMNSNTFQDQPQQQHSYKFGSLSHTNAATRQQAVDHNIACIELGIAIGSKALTIWVGDGS
NFPGQTNFTRQFERYLEAAKQVYNALPDDWTLLSEHKMYEPAFYSTVVQDWGTNLLIAQQ
MGDKAKCLVDLGHHAPNTNIEMIVARLIQFGKLGGFHFNDSKYGDDDLDTASIDPYRLFL
VFNELVEAEAQADFDPMHMLDQSHNVTDPIESLMVSATEVQRAYAQALLVDRTALLGFQE
DNDALMATTTLKQGFRTDVEPILAMARLEQNGAIDPVATYRASGYRAKVSADRPAVSGAG
GGIV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgatccattcagacatcatcgcgcagaccaatgaaactgcgatggcaaaattgctggca
gattatgacgctctgggcgcgcagcttgagaggcgcgggatcgacatcgcggcgatcaag
gaccgggtggcaaactatggcgtggcggtgcccagttggggcgttggcaccggcggcacg
cgtttcgcgcgctttcccggccccggcgagccgcacgacattttcgacaagctagatgat
tgcgggctgatccatcaattgacgcgcgcgacaccttccgtgtcgttgcatatcccgtgg
gatgcacaacctgccgccgatctcaacagcaaggcggaagaagtcggtctgcgctttgac
gcgatgaactccaacacctttcaggatcagccgcaacagcagcacagttacaaattcggc
tccctttcccacacgaacgcggccacgcgccagcaagccgttgatcacaacattgcatgt
atcgaactggggatcgccatcggatcgaaggcgctgacaatctgggtcggcgatgggtcg
aactttccgggacagaccaactttaccaggcagtttgaacgctacctcgaggcggcaaaa
caggtctacaacgccttgcccgacgactggacgctgctgagcgaacacaagatgtatgaa
cccgccttctattccacggtggtgcaggactggggcacaaacctgctgatcgcgcagcag
atgggcgacaaggcgaaatgccttgtggatctgggccatcatgcgcccaacacgaacatc
gagatgatcgtcgcgcggctgatccagtttggaaagcttggcggatttcatttcaatgac
agcaaatacggcgacgatgacctcgacacggccagcatcgacccctaccgcctgtttctc
gtgttcaacgagttggttgaggcggaggcgcaggctgatttcgacccgatgcatatgctg
gatcaaagccacaacgtgaccgatccgatcgaaagcctgatggtgtcggcaacagaggtg
cagcgcgcctatgcgcaggcgctgttggtggatcgcaccgccttgctgggctttcaggaa
gacaacgatgcgctcatggccacaacgaccctgaaacaggggtttcgcacggatgtcgaa
cccatcctcgcaatggcacgtcttgagcagaacggtgccattgacccggttgcgacctat
cgcgcatccggctatcgcgccaaagtcagcgccgatcggcccgccgtgtccggtgcgggc
ggcggaattgtgtag
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