Roseobacter denitrificans: RD1_3107
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Entry
RD1_3107 CDS
T00376
Name
(GenBank) probable regulator protein containing CheR-and CheB-like domains
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
rde
Roseobacter denitrificans
Pathway
rde02020
Two-component system
rde02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD1_3107
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
RD1_3107
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rde02022
]
RD1_3107
02035 Bacterial motility proteins [BR:
rde02035
]
RD1_3107
Enzymes [BR:
rde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
RD1_3107
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
RD1_3107
Two-component system [BR:
rde02022
]
CheA family
CheA-CheYBV (chemotaxis)
RD1_3107
Bacterial motility proteins [BR:
rde02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
RD1_3107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheB_methylest
CheR
PAS_3
CheR_N
PAS_9
PAS
HMMR_N
PAS_10
Filament
EXOC6_Sec15_N
Golgin_A5
Fez1
DUF3450
PAS_8
HAUS-augmin3
Wtap
Seryl_tRNA_N
ATG16
HIP1_clath_bdg
ATG14
CCDC22_CC
Exonuc_VII_L
OmpH
Rootletin
AAA_23
GCOM2
ZapB
RPW8
IFT57
Syntaxin-6_N
FliD_N
FUT8_N_cat
CENP-F_leu_zip
RasGAP_C
Snapin_Pallidin
TPR_MLP1_2
FapA
DUF1664
Motif
Other DBs
NCBI-ProteinID:
ABG32616
RoseoBase:
RD1_3107
UniProt:
Q164H7
LinkDB
All DBs
Position
complement(2983032..2986286)
Genome browser
AA seq
1084 aa
AA seq
DB search
MKDENKDITIIGIGSSAGGLEAIRELVATLPTNMNVAYVVVQHMSPHHKSLMTELVARQT
SLSVKDVKDGILPEPNVIYVTPPNTDIIYDDGKLRLIEPSHEVASPKPSVDRFLLSLADQ
HGESAMAIILSGTGTDGAYGVQAIREAGGITIAQDTESAKYDGMPMSAMQTGCVDLVLRP
FEIGTHLQKILSSARDFDAFRQETSDTSPALDLLQILLARTRVDFREYKQTTINRRIERR
MVALGIETHAEYTQFCRENPNAVDALFKDLLISVTRFFRDKSEFEQLKEMLPALLKKKET
RPFRVWIAGCATGEEAYSIAMLLSEALGGPTVNLKDHVQIFATDIDKEALDVARKGVYGM
AALNDIPKTLSDRYFMTQNDGIRVIDSLRSAILFSDHNVCQDPPFQKVDLLCCRNLLIYF
GNALQHKVMSRFHYAMTDNSLMFLGTAETVAGSDEMFVQDSHSAHIYRRRSIRRSDQNVF
SNPRNLPQSRSKVPAPAKQGQEQGQSTDRQMFEALALALGKNSVLVTDDYGIIRVYGNVS
PFIEMNETSNLKMHIDLLRRPFREEARSLVTLALKHGEHRSGVRHLLAEDDDAEIRLDVY
PIVARDINERAALVVFSEMKVDRSKAAGTSEVDEDTVFESDRIRLLEDEVATTREALQQT
IEELETSNEELQSLNEELQSTNEELQATNEELETSNEELQSTNEELITVNEELQVTAAEL
SGRTGELMSVLETAPLSIMVLDTALQISQATNAACDMFSLARPVSNPHVSQCVLPNNFPP
LAPICNETLKLGEPISKEFNSGGSRYKLTSSPFFDMRGQMKGVTIVISAFPGLAQELELI
LDHGELYMLNRAQDGTILRISEKSARFFGTTRNKAEGANFYNLVSRSISNTIREHDARLM
KAEGGHLRDMLRLRSVEDNTEICLNSENFLFDNLAGGEASIYTIGQDISEVIETRDKAEE
SLAQLILLQEIARIGFWSLDLENDKVFWSEEVYRIHGKDPDTFSPKLEDGLSFYHPDDRK
TVQAEVEKVRTLGGEFHFKMRIINADGETVPVESFGLARQDMHGNIGKIIGVFRVCEDEG
PTTH
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacgagaacaaagatatcaccatcatcggcatcgggtcttcggctggtggtctt
gaggcaatccgcgaactcgtcgcgaccttgccgacgaatatgaacgtggcatatgtggtc
gttcaacacatgtcgcctcatcacaaaagcctgatgaccgaactggttgcgcgccaaacc
agcctgagtgtaaaggatgtcaaggacggcattctgccagagccgaatgtcatatacgtt
acccccccgaacaccgatatcatctatgatgatggcaagctgcgtctgatcgagcccagt
catgaggtggcatcgcccaaaccctccgtcgaccggttcttgttgagtctcgctgatcag
catggtgagagcgccatggcaatcatcttgtccggcacagggacagacggtgcctatggt
gtgcaggcgatccgcgaggcaggcgggatcaccattgcgcaggatacggaaagcgccaaa
tacgacggcatgccgatgtcagcgatgcaaacgggttgcgttgatctggtcttgcggccc
ttcgaaatcgggacgcacttacagaagatactctcctctgcccgtgactttgatgccttt
cgtcaggaaacgtccgacaccagcccggcattggatctgttgcaaatccttcttgcccgc
acgcgcgtggactttcgcgagtacaagcaaaccacgatcaaccggcgcatcgagcgccgt
atggtggccctggggatcgaaacgcatgcggaatacacgcaattctgtcgtgagaatccg
aatgccgtggatgcgctcttcaaggatctgttgatatcggtcacccggtttttccgcgac
aagtccgagtttgagcaactcaaggagatgttgcccgcactgctcaagaaaaaggaaacc
cgcccgtttcgggtctggatcgccggatgtgcaacgggggaagaggcctattcgatcgcg
atgctgctctcggaagcgcttggggggccaacggtaaacctcaaggaccacgtgcagata
tttgcaactgacatcgataaagaggctttggacgtcgcacgcaagggcgtctacgggatg
gccgcgctgaacgacatccccaaaaccctgtcggatcgctatttcatgacgcagaacgat
ggcatccgggtgatcgattccctgcgttcggccatcctgttttccgatcacaacgtctgt
caggatccgccctttcagaaggtggatttgctctgctgccgtaaccttttaatttatttt
ggaaatgccctgcagcacaaggtcatgtcgcggttccactacgccatgactgacaactcc
ctgatgttcttggggacggcggaaacagtcgcggggtccgacgagatgttcgttcaggac
agtcattctgcccatatataccggcgccgctcgatccggcggtccgatcagaacgtgttt
tccaatccgcgaaacctgccacaatcgcgcagtaaggtgcccgcaccggccaaacagggt
caggagcagggccaatccacggaccgccaaatgttcgaggcgctggcgctcgctctgggc
aagaattcggttttggtaacggatgattacgggatcatccgggtctacgggaacgtcagc
cccttcatcgagatgaacgagaccagcaacctcaagatgcatatcgacctgttgcgccgg
ccatttcgtgaagaagcacgcagccttgtgacactggccctcaaacacggcgagcatcgc
agtggcgtgcgccatctgttggcggaagacgacgatgccgaaatccggctggatgtttat
ccgatcgtggcgcgcgacatcaacgaacgtgcggcgctggtggtgttctccgagatgaag
gtcgaccgctcgaaggcggccggtacgtcggaggtcgacgaggatacggtctttgaaagc
gacaggatccgtttgctcgaagatgaagtggcaacaacccgcgaggccctgcagcagacc
attgaggagttggaaacctccaacgaggaactgcaatccctgaacgaggaattgcaatcc
accaatgaggaattgcaggccaccaacgaggaattggaaacctccaacgaagagctgcaa
tccaccaacgaggagttgattacggtcaacgaagagcttcaggtcacggcggcggaactg
agcgggcgcacgggcgaattgatgtcggtccttgaaaccgcgccgctgtcgatcatggtg
ctggatactgccttgcagatatcgcaagcgaccaacgcggcctgcgatatgttcagtctg
gcgcgtccggtgtccaatccgcatgtcagccaatgtgtgctgcccaacaacttcccgccg
ctggccccgatctgcaacgaaaccctcaaactgggcgaaccgatctcaaaggaatttaat
tccggcggctcgcgctacaagctgaccagttcgcctttctttgacatgcggggccagatg
aagggggtcacgatcgtgatctctgcatttccgggcctggcgcaggagttggagcttatt
ctggaccatggtgaactctatatgctgaaccgggcccaggatggcaccatcctgcggatc
agcgaaaagtcggcacgttttttcggcacgacacggaacaaggcagaaggcgccaatttc
tacaatctggtgtcaaggagcatttcgaacaccatacgcgaacatgatgcgcggctgatg
aaggccgagggtgggcatctgcgcgatatgctgcgtctcagatctgtcgaagacaacacg
gaaatctgtctgaattcagaaaacttcctctttgataacctggcagggggggaggcgtcg
atttataccatcgggcaggatatctctgaggtgatcgagacacgtgacaaggcagaagaa
tctctggctcagttgatcctgttgcaggaaatcgcacgtatcggcttctggtcgctggat
ctggagaatgataaagtcttctggtccgaagaggtgtatcgcatccacggcaaagatccc
gatacattttctccgaaactggaggatggattgtctttctatcaccctgatgaccgcaaa
acggtgcaagctgaagtggaaaaagtgcgcacactgggcggagagtttcatttcaaaatg
cgcatcatcaatgcagacggggaaacggttccggttgagtccttcggtctggcccgtcag
gacatgcacggcaacatcggcaagatcattggcgtctttcgtgtctgtgaggacgaaggg
cccacaactcactag
DBGET
integrated database retrieval system
