Roseobacter denitrificans: RD1_3816
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Entry
RD1_3816 CDS
T00376
Symbol
cobF
Name
(GenBank) precorrin-6A synthase (deacetylating), putative
KO
K02228
precorrin-6A synthase [EC:
2.1.1.152
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00860
Porphyrin metabolism
rde01100
Metabolic pathways
rde01240
Biosynthesis of cofactors
Module
rde_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RD1_3816 (cobF)
Enzymes [BR:
rde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.152 precorrin-6A synthase (deacetylating)
RD1_3816 (cobF)
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GFIT
Motif
Pfam:
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
ABG33280
RoseoBase:
RD1_3816
UniProt:
Q161R3
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Position
complement(3687436..3688179)
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AA seq
247 aa
AA seq
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MISHLWLIGIGTGAMSHITLEGQQAIRDAAVILLPRKGAGKDDLATVRLKIIAAAGAQAK
VVPFEMPVRDDTLPYQERVALWHDQIALAWQGALAETEITGPVALLVWGDPGLYDSTLRI
AERLSPRPTIRVVPGVTALQALTAAHAIPFNTIDGSVCVTTGQQLRTHALPGNAETVVVM
LDGKCSFMALDDPDLMIWWGAFLGMPEQITIKGHLRDVGAQIVEKRAKARADHGWIMDTY
LLRKGDR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgcatctgtggctcatcgggattggtaccggcgcgatgtcgcatatcacgctg
gaaggccagcaggcgatccgcgacgcggccgtgatcctgttgccgcgcaagggggcgggc
aaggatgacctcgccacggtgcgtctgaaaatcatcgcggccgctggcgcgcaggcaaag
gtcgtgccgttcgagatgccggtgcgcgatgatacactgccctatcaggaacgtgtggcg
ctgtggcatgatcagatcgcgctggcgtggcagggcgctttggcagaaacagaaatcaca
ggtccggttgccctgttggtctggggcgatcccggattatacgacagcaccctgcgcatt
gccgagcgcctgtcgccgcgccccacgatccgggttgttccgggggtcacggctttgcag
gctttgacagccgcgcatgccatccccttcaacacaatcgacgggtcggtctgcgtcacg
accggccagcaactgcgcacccatgctctgccgggcaacgcagagactgtcgttgtgatg
ctggatggtaaatgcagtttcatggcgctggatgatccggacctcatgatctggtggggg
gcttttctgggcatgcccgaacagataaccatcaagggtcacctgcgcgatgtgggcgcg
cagatcgtggaaaaacgggccaaggcccgcgcggatcatggctggatcatggatacgtat
ttgctgcgcaaaggcgacagatga
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