KEGG   Roseateles depolymerans: RD2015_133
Entry
RD2015_133        CDS       T04166                                 
Name
(GenBank) integrase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
rdp  Roseateles depolymerans
Pathway
rdp00250  Alanine, aspartate and glutamate metabolism
rdp00330  Arginine and proline metabolism
rdp01100  Metabolic pathways
rdp01110  Biosynthesis of secondary metabolites
Module
rdp_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:rdp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    RD2015_133
   00330 Arginine and proline metabolism
    RD2015_133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rdp03000]
    RD2015_133
Enzymes [BR:rdp01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     RD2015_133
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     RD2015_133
Transcription factors [BR:rdp03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    RD2015_133
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg
Other DBs
NCBI-ProteinID: ALV04638
UniProt: A0A0U3KZY2
LinkDB
Position
155486..159076
AA seq 1196 aa
MTAFALPPETSRLPDPYRDELPLVRALAEELQKLNWASVIDQARPWVQQVRNNPAPFWAM
ESLLREYPITSAEGLALMRLAEALLRVPDAETAIALTADQLGRADFDGSSDGPHKMLAGL
AASAISLSKKFLPDAESDTGLFKRLGAQTVVAATVRAIQLLGRQFVLGRNIAEAMAEADA
ARKVQRQLRFSYDMLGEGARTERDAERYQASYLAAIAAIAGGRRAESPEGSDGISIKLSA
LFSRYEVLQRERVYAELLPRVWQLVEKAAQANINLTIDAEEVDRLELSLELLDALAARIA
GHFPDWRGFGLAVQAYQTRARAVVDEVAAIARKHGLRFMVRLVKGAYWDGEIKRAQEQGL
PTYPVFTHKPHTDVSYLACAQALLQHHDVIYPQFASHNAGTIAAILQMARSLGAKFEMQR
LHGMGEGVYREVLKDGSIPCRVYAPVGEHRDLLAYLVRRLLENGANSSFVHQLADPLVAP
EELLGSPLTLIQSQPSLPLPFDLFRNNTGRGRDNSRGLDLAVPEHRQPLLDALATCQVPI
LAEATDADVDEAMTRLKAGFPAWNATPVAQRAAVLRRAADALQAALPAYCALLVKEAHKS
FGDAISEVREAIDFMRYYADEAERLSDDGVALNGRGVFVCISPWNFPLAIFAGQVVAALA
AGNSVAAKPAEQTPVVARECVALLHAAGVPADALALLHGQGETVGARLVASPHTAGVCFT
GSTQVAQIINRQLASKPGAGTLPLIAETGGLNAMIVDSTALPEQVIDAVVQSAFRSAGQR
CSALRLLAVHEAVADGVIEMLRGAVRELRVGDSANLATDVGPLIDDEAFQSISGEVQRLK
SGARVIAEASVADGGPRLLAPIAVELSGIQDLKKEIFGPVLHVVRWSGDVENVVRQINAL
GYGLTLGIQTRIDSRALRLASEARIGNVYVNRNIIGAVVGVQPFGGEGMSGTGPKAGGPH
YLLRFAAPATPTPVVDEAPAVLTLSAGADLSGLFQAHEAWAARALAERASLIERAAAGQG
PDVTQSWQDIARWARTALADQSLPGPTGESNELRLHGRGVMAVLAQGLTPLELARALAAA
LVAGNAVAVVGGSDVARELREALLRGGVAAAAVALLPADQLVPVLAAKQLAGVVAPATLL
ASVQRALASRDGAILPVIPAAEAGHPRQLYRFVAEQTLTINTAAAGGNAALLAGVH
NT seq 3591 nt   +upstreamnt  +downstreamnt
atgaccgccttcgccctgccgccggaaacctcacgcctgccggacccctaccgcgacgaa
ctgccgctggtgcgcgcgctggccgaagagctgcaaaagctcaactgggcgtcggtcatc
gatcaggcccgtccctgggtgcagcaggtgcgcaacaaccccgccccgttctgggcgatg
gaatccctgctgcgtgaatatcccatcaccagcgccgagggcctggccctgatgcgtctg
gccgaagcgctgctgcgggtgcccgacgccgaaaccgccatcgccctgaccgccgaccag
cttggccgggccgacttcgacggcagctccgacggcccccacaagatgctggccggcctg
gccgccagcgccatctcgctgtccaagaaattcctgcccgacgccgagtccgacaccggc
ctgttcaagcgcctgggcgcgcagaccgtggtcgccgccacggtgcgcgccatccagttg
ctgggccgccagttcgtgctgggccgcaacatcgccgaagccatggccgaggccgatgcg
gcccgcaaggtgcagcggcaactgcgcttctcctacgacatgctgggcgaaggcgcccgc
accgagcgggatgccgagcgctaccaggcgtcctacctggccgcgatcgccgccatcgcc
ggtggccgccgtgccgagtcgcccgaaggcagcgatggcatctccatcaagctgtcggcg
ctgttctcgcgctatgaagtgctgcagcgcgagcgcgtgtatgccgagctgctgccccgc
gtctggcaactggtggaaaaggccgcgcaggccaacatcaacctgaccatcgacgccgag
gaagtcgaccgcctggaactctcgctcgaactgctggacgcgctggccgcccgcatcgcc
ggtcatttcccggactggcgcggcttcggcctggccgtgcaggcctaccagacccgtgcc
cgcgccgtggtcgacgaagtggctgccatcgcccgcaagcatggcctgcgcttcatggtc
cgcctggtcaagggcgcctattgggatggcgagatcaagcgcgcccaggaacaggggctg
ccaacctacccggtcttcacccacaagccccacaccgacgtgtcctacctggcctgcgcc
caggcgctgctccagcatcacgacgtcatctatccccagttcgccagccacaacgccggc
accatcgccgccatcctgcagatggcgcggtccctgggcgccaagttcgagatgcagcgc
ctgcacggcatgggcgagggcgtctaccgcgaggtgctcaaggacggcagcattccctgc
cgcgtctacgcgcccgtgggtgagcaccgcgacctgctggcctacctggtgcgccgcctc
ctggaaaacggcgcgaactcttcgttcgtgcatcagctggcggatccgctggtggcgccc
gaagagctgctgggctccccgctgaccctcatccagagccagcccagcctgccgctgccg
ttcgacctgttccgcaacaacaccggccgcggccgcgacaactcccggggcctggacctg
gccgtgcccgagcaccgccagcccctgctggacgcgctggccacctgccaggtgcccatc
ctggccgaagccactgacgccgatgtggacgaggccatgacacgtctgaaggccggcttc
ccggcctggaatgccacgccggtggcccagcgcgccgccgtgctgcgtcgtgctgcggat
gccctgcaggccgcgctgccggcctactgcgccttgctggtcaaggaagcgcacaagagc
tttggcgatgccatctccgaggtccgcgaggccatcgacttcatgcgctattacgccgat
gaagccgaacgcctgtccgacgacggcgtggcgctgaacggacgcggcgtcttcgtctgc
atctcgccgtggaacttcccgctcgcgatctttgccggtcaggtggtggccgcgctggcc
gctggcaacagcgtggccgccaagcccgctgagcagacgcccgtggtggcccgtgagtgc
gtggcccttctgcacgccgccggcgtgccggcggatgcgctggccctgctgcatgggcag
ggggagaccgttggcgcccgactggtcgcgtcgccgcacacggccggtgtgtgcttcacc
ggctccacgcaggtggcccagatcatcaaccgtcaactggccagcaagcccggcgccggg
acgctgccgctgatcgccgagaccggcggcctgaacgccatgatcgtggactcgacggcc
ctgccggagcaggtcatcgatgccgtggtgcagtccgctttccgcagtgccggccagcgc
tgctccgccctgcgcctgctggcggtgcatgaggccgtcgccgacggggtcatcgaaatg
ctgcgcggtgccgtccgcgaattgcgggtgggcgacagtgccaacctggccaccgatgtc
ggcccgctgatcgacgacgaggccttccagtccatctccggcgaagtgcagcgcctcaag
agcggggcccgggtcatcgccgaggcctccgtggcggatggcggcccgcgcctgctcgcg
ccgatcgccgtcgagctgtcgggcatccaggatctgaagaaggaaatcttcggcccggtg
ctgcatgtggtgcgctggagcggggacgtggagaacgtcgtccgccagatcaatgcgctg
ggctatggcctgaccctgggcatccagacccgcatcgacagccgcgccctgcgcctggcc
tctgaggcccgcatcggcaacgtctatgtgaaccgcaacatcatcggtgcggtggtgggc
gtgcagccgttcggcggtgaaggcatgtccggcaccggtcccaaggccggcggtccgcac
tacctgctgcgatttgcagcgccggccacgccgacgccggtggtggacgaagccccggcg
gtcctcacgctgtcggccggcgcggatctgtcgggcctgttccaggcgcatgaagcctgg
gccgcgcgggcactggccgagcgtgcctcgctgatcgagcgtgccgcagccggacagggg
ccggacgtgacccagtcctggcaggacatcgcccgctgggcccgcaccgcactggccgac
cagtcgctgcccggacccacgggtgagagcaacgaactgcgtctgcatggccgcggcgtg
atggccgtgctggcccagggcctgacgccgttggaactggcgcgtgctctggctgccgca
ttggtggccggcaatgccgtggcggtggtgggcggcagcgatgtggcccgtgaactgcgc
gaggcgctgctgcgcggcggtgtagccgccgctgcggtggcgctgctgccggcggatcaa
ctggtgccggtgctggccgcgaagcaactcgcaggcgtggtggcgcccgcgacgctgctg
gcgtcggtgcagcgggcgctggccagccgcgacggtgccatcctgccggtgatcccggcg
gccgaggcgggtcatccgcgtcagctctatcgctttgtcgccgagcagacgctgaccatc
aacaccgcagcggcgggcggcaatgcggccctgctggcaggcgtgcactga

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