Roseateles depolymerans: RD2015_3357
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Entry
RD2015_3357 CDS
T04166
Name
(GenBank) Tetracycline-efflux transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rdp02000
]
RD2015_3357
01504 Antimicrobial resistance genes [BR:
rdp01504
]
RD2015_3357
Transporters [BR:
rdp02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
RD2015_3357
Antimicrobial resistance genes [BR:
rdp01504
]
Gene variants
Tetracycline resistance genes
Transporters
RD2015_3357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
Motif
Other DBs
NCBI-ProteinID:
ALV07815
UniProt:
A0A0U3LRZ7
LinkDB
All DBs
Position
complement(3928227..3929486)
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AA seq
419 aa
AA seq
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MSDSDRSDAHGGRKAAMSFILIAVLIDMVSIGLIIPVLPMLVGTFTESERQHTLAQLAVA
FAFGLANFFGSPILGGLSDRFGRRKVMLVGFSGLALSFFVTAMAQALWMLVVVRLFSGAM
QANAAVANAYVADITPPADRAKRFGMLGAAFGMGFILGPVAGGLLGSIDLHLPFFVAGTL
ALLNWCYGFFVLPESLPPEHRRPFNWRQANPLASLSRVRDLRGVGPLIYVIACSGLAQLI
IQTCWVLYNQHKFGWGPRENGLSLFAVGLMAVIVQGGLLQPLIRWLGTRRLVLIGLSSAI
VTNLVWGMAQEGWMMVGIIFFNIAGFAAPTALQSLVSNAADARNQGETMGAVAAINSLMA
VLSPICGLGLMALVAELPKTDWRLGAPFYFCAALQLLSLYFSWRHFHEVPVEAAAPAKA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgactcggatcgctccgacgcacatggcggccgcaaggccgccatgtcgttcatt
ctgatcgcagtgctgatcgacatggtgtcgatcggcctgatcattccggtcctgcccatg
ctggtgggcaccttcaccgagtcggaacgccagcacacgctggcacagctggccgtggcg
tttgccttcggcctggccaatttcttcgggtcgcccatcctgggcggcctgtccgaccgc
ttcggccgccgcaaggtgatgctggtgggcttcagcggcctggcgctcagcttcttcgtc
accgccatggcccaggcgctgtggatgctggtggtggtgcgcctgttctccggggcgatg
caggccaatgccgccgtcgccaatgcctatgtggccgacatcacgccgcccgcggaccgg
gccaagcgctttggcatgctgggcgcggcgtttggcatgggcttcatcctcggcccggtg
gccggggggctgctcggcagcatcgacctgcatcttcctttcttcgtggccggcaccctg
gcactgctgaactggtgctatggcttcttcgtgctgccggagtcgctcccgcccgaacac
cgccgccccttcaactggcggcaggccaatccgctggcgtcgctgtcgcgggtgcgggac
ctgcggggcgttgggcccctcatctacgtcatcgcctgctccgggctggcccagctcatc
atccagacctgctgggtgctctacaaccagcacaaattcggctggggcccgcgcgagaac
ggactgtcgctgttcgccgtggggctcatggcggtcatcgtccagggcggccttctgcag
ccgctgattcgctggttgggcacccgccgcctggtgctcatcggcctgagctccgccatc
gtcaccaatctggtgtggggcatggcccaggaaggctggatgatggtgggcatcatcttc
ttcaacatcgccggttttgcggcgccgacggccttgcagagcctcgtctccaacgctgcc
gatgcgcgcaaccagggcgagaccatgggcgccgtggcggccatcaacagcctgatggcg
gtgctgtctcccatctgcggcctgggcctgatggcgctggtggccgaactgcccaagacc
gattggcggctgggcgctcccttctatttctgcgcggcgctgcaactgctgtcgctgtat
ttttcctggcggcacttccatgaagtgcccgtcgaagcggccgctccggccaaggcctga
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