Rhizobium etli CIAT 652: RHECIAT_CH0003813
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Entry
RHECIAT_CH0003813 CDS
T00720
Symbol
kdsD
Name
(GenBank) arabinose 5-phosphate isomerase protein (involved in capsule formation)
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec00540
Lipopolysaccharide biosynthesis
rec01100
Metabolic pathways
rec01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RHECIAT_CH0003813 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rec01005
]
RHECIAT_CH0003813 (kdsD)
Enzymes [BR:
rec01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
RHECIAT_CH0003813 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
rec01005
]
Lipid A
RHECIAT_CH0003813 (kdsD)
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Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
DUF5998
Motif
Other DBs
NCBI-ProteinID:
ACE92751
UniProt:
B3PZV1
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All DBs
Position
complement(3847332..3848327)
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AA seq
331 aa
AA seq
DB search
MNRRAIKLVENGVLESAKRTIEIEKRGLEALEQALDNGLAGPFTRAIEVIGDISGRVIVT
GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI
ISFTRRFSIPLIALTCGESSSLATAADIVLLVPNEQEACPNGLAPTTSTLMQLALGDALA
VALLEARGFTATDFHVFHPGGKLGASLTHVADIMHTGERLPLVAKGTPMPEAITVLSRKH
FGCVGVLDEEGRLCGIVTEGDMARNLTRNLAELAVDDIMTKTPKTVKPTMLATAALALLN
QHSIGALIVVDDDRRPLGLVHFHDLLRIGVA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaagagcgataaaactggtcgaaaacggcgtgctcgaatcagcaaaacgcacg
atcgaaatcgaaaaacgcggtcttgaagcgctcgaacaggccttggacaatggattggcc
ggcccgttcacccgcgcaatcgaagtcatcggcgatatctccggccgggtgatcgtcacc
ggcgtcggcaagagcggccatattggcgccaagctggcggcgaccttcgcttcgaccggg
acgcccgccttcttcgtgcatgcggccgaagccaatcacggcgatctcggcatgatcgcg
cgcgacgacgtcgtgctggcgatttccaagggtggcgagagcgccgagctcaagagcatc
atttccttcacgcggcgcttctccattccgttgatcgcgctcacctgcggcgaaagctcc
tcgcttgccactgccgccgatatcgtgcttctggtgccgaatgagcaggaagcctgcccc
aacggtctggcgccgacgacctcgacactgatgcagcttgcgcttggcgacgccttggca
gtggcgcttctggaggcacgcggctttaccgccaccgatttccacgtcttccatcccggc
ggcaagctcggcgccagcctgacgcatgtcgccgacatcatgcataccggcgagcggttg
ccgctcgttgccaagggcacgccgatgccggaggcgatcaccgtgctgtcgcgcaagcat
ttcggctgcgtcggtgtgctcgacgaggagggacggctctgcggcatcgtcaccgaaggt
gatatggcgcgcaacctcacccgcaatctcgccgagcttgccgtcgacgacatcatgact
aagacgccgaagaccgtgaagccgacgatgctggcgaccgcggcccttgcgctgctcaat
cagcacagcatcggcgcgctgatcgtcgtcgacgatgatcggcggccgctcgggctggtg
catttccatgacctgctgcggatcggcgtcgcctga
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