Rhizobium etli bv. mimosae Mim1: REMIM1_PD00479
Help
Entry
REMIM1_PD00479 CDS
T02778
Symbol
cobF
Name
(GenBank) precorrin-6A synthase (deacetylating)
KO
K02228
precorrin-6A synthase [EC:
2.1.1.152
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00860
Porphyrin metabolism
rel01100
Metabolic pathways
rel01240
Biosynthesis of cofactors
Module
rel_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
REMIM1_PD00479 (cobF)
Enzymes [BR:
rel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.152 precorrin-6A synthase (deacetylating)
REMIM1_PD00479 (cobF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
Sugar-bind
Motif
Other DBs
NCBI-ProteinID:
AGS25089
UniProt:
S5SU16
LinkDB
All DBs
Position
pRetMIM1d:complement(507529..508293)
Genome browser
AA seq
254 aa
AA seq
DB search
MKHINIIGIGTGNSEHVTMQAIKAMNAAEVIFLPLKGADKEELAEIRREICERYVTRSAV
RTVEFQVPQRQTADRTYTQSVDAWHGEIAEIYGELISGLPDGGTGAFLVWGDPSLYDSTI
RIIERVRQANSIEFDYSVVPGITSIQALAASHKIPLNLVGEPVEITTGRRLARDGLRGGS
TVVMLDGEQTFAKIDDADAEIFWGAYLGTGDEIIRSGRLTDIAADIQALRTEARQRHGWI
MDIYLLRKGRDFEE
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcatattaatatcatcggaatcggcacgggcaattcggagcacgtcactatgcag
gcgatcaaagcaatgaacgccgccgaggtgatcttcctgccgctcaagggcgccgacaag
gaagagctcgccgagatcaggcgggagatctgcgagcgctacgtcactcggtcagctgtc
cgaaccgtggaattccaggtgccgcaaaggcagaccgcagacagaacctacacacaaagc
gtcgatgcctggcatggcgagatcgccgagatctatggagaattgatctcgggcctgccg
gacggcggcaccggcgcgtttctcgtctggggtgatcccagtctttacgacagcacgata
cgcatcatcgaacgcgtgcgccaagcaaacagcattgaattcgactacagtgtcgttccc
ggcatcaccagcatccaggctttggcggccagccacaaaatcccgctcaacctcgtcggc
gagccggtcgagatcaccactgggcggcggctggcgcgggatggacttcgaggcggcagc
acggtcgtcatgctcgatggcgaacagacttttgcgaagatcgacgatgccgacgccgag
atcttctggggcgcctatctcggcaccggggacgagatcatccggtcggggcggcttaca
gacatcgcagccgacattcaggcgctgcggaccgaggcgaggcagcggcacggctggatc
atggacatatatctgctgcgcaagggacgcgacttcgaggagtag
DBGET
integrated database retrieval system
