KEGG   Rhizobium etli CFN 42: RHE_CH01510
Entry
RHE_CH01510       CDS       T00317                                 
Symbol
ribD
Name
(GenBank) 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidinedeami nase protein
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
ret  Rhizobium etli CFN 42
Pathway
ret00740  Riboflavin metabolism
ret01100  Metabolic pathways
ret01110  Biosynthesis of secondary metabolites
ret01240  Biosynthesis of cofactors
ret02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ret00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    RHE_CH01510 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RHE_CH01510 (ribD)
Enzymes [BR:ret01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     RHE_CH01510 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     RHE_CH01510 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ABC90313
RhizoBase: RHE_CH01510
UniProt: Q2KA23
LinkDB
Position
1587303..1588610
AA seq 435 aa
MSVTPDDEGFMAAAIRLSRRHLGRTATNPSVGCVIVKDGVVVGQAVTALGGRPHAEPQAL
AEAGDLARGATAYVTLEPCSHHGKTPPCAEALIACGVARVVISVTDPDPRVSGRGISMLR
EAGIAVDAGVLEAEGRRSLAAYLTRQTKNRPYVTLKLAVSADGMIGRQGEGQVAITGPEA
RAEVQTLRAETDAILVGIGTAISDDPLLTVRTPGLEAQSPIRIVLDPLLSLPLTSKLVAT
ARDVPVILVASEEISPLGSEEGSPPSVLPGISPARGEIGKRRDPNFQGSGSPFATEDVGQ
GATSQPISPPVGEMPGRAEGGASSVDATDADARRVALEAAGVEIVYCNPYHPEVLLPALA
TRGISSLLIEGGAKTAKLFLEAGLLDRIQLYQAPVVIGEGGIESPVQATDIPSGFTHMGT
QLFGVDRLDEYEREN
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgagcgtcacgccggatgacgaaggtttcatggcggcggcgatccgcctgtcgcgccgg
catctcggccgtaccgccaccaacccctccgtcggctgcgtaatcgtcaaggacggcgtc
gtcgttggccaagccgtgaccgcgcttggcggtcgcccgcatgccgagccgcaggcgctt
gccgaagctggcgatcttgcccgcggcgccaccgcctatgtcacgctcgaaccctgctcg
catcatggcaagacgccgccctgcgccgaagcgctgatcgcctgtggcgtcgctcgagtc
gtcatcagcgtcaccgatcctgatccgcgtgtctcgggccgcggcatttccatgctgcgc
gaagccggcatcgcggtggacgccggtgtgctggaggcggaaggccggcgttcgctcgcc
gcctatctcacccgccagacgaagaaccgcccctatgtgactctcaaacttgccgtttcc
gccgatggcatgatcggccgccaaggggagggccaagtggcgataacagggccggaggcg
cgcgctgaggttcagacgctgcgggccgaaaccgatgccatcctggtcggtatcggcact
gcaatatcggacgacccgctgctgacggtgcgcacgccgggcctggaggcgcaatcgccg
atccgcatcgtgctcgatccgttgctgtcactgccactgaccagcaagctggttgcgaca
gcgcgggacgtgccggtcatcttggttgcgagtgaagagatttcgccgttagggtcagag
gaagggtcacccccctctgtcctgccgggcatctcacccgcaaggggggagatcggcaag
aggcgcgatccgaattttcaaggcagcgggtcgccgttcgctacggaagatgtagggcag
ggagctacctcccagccaatctccccacctgtgggggagatgcccggcagggcagagggg
ggcgcctcgtccgttgacgcaaccgacgcagacgctcgccgcgtcgcgctcgaagccgcc
ggtgtcgagatcgtctattgcaatccctatcatccggaagtcctgctgccggctctagca
acgcgcggcatttcctcgcttctgatcgagggcggcgccaagacggcgaagcttttcctc
gaagccggtctccttgaccgcatccaactttaccaggcgcccgtcgtcatcggcgagggt
ggtattgaatccccggtgcaggcaaccgacataccatccggttttacccatatgggcacg
cagttgttcggcgtcgatcgcctggacgaatatgaaagagagaattga

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