Cupriavidus pinatubonensis JMP134: Reut_A0873
Help
Entry
Reut_A0873 CDS
T00268
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
reu
Cupriavidus pinatubonensis JMP134
Pathway
reu03030
DNA replication
reu03410
Base excision repair
reu03420
Nucleotide excision repair
reu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
reu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Reut_A0873
03410 Base excision repair
Reut_A0873
03420 Nucleotide excision repair
Reut_A0873
03440 Homologous recombination
Reut_A0873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reu03032
]
Reut_A0873
03400 DNA repair and recombination proteins [BR:
reu03400
]
Reut_A0873
Enzymes [BR:
reu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Reut_A0873
DNA replication proteins [BR:
reu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Reut_A0873
DNA repair and recombination proteins [BR:
reu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Reut_A0873
NER (nucleotide excision repair)
GGR (global genome repair) factors
Reut_A0873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AAZ60252
UniProt:
Q474D1
LinkDB
All DBs
Position
1:947815..950640
Genome browser
AA seq
941 aa
AA seq
DB search
MSDSPKTLLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAEYSACV
FDAKGKTFRDEMYPAYKEHRPSMPEDLARQIEPIHEAVRALGWPIVVVEGVEADDVIGTL
ARQAAEQGVRTVVSTGDKDLAQLVNDQVTLVNTMSGEVLDPAGVNAKFGVPPERIVDYLS
LIGDAVDNVPGVPKVGPKTAVKWLTEHGTLDNIMAGAAGIKGVVGENLRNTLDWLPKARE
LVTVKTDCDLSAAVADFHALREIGEDKEKLIAFFTRYGFKTWLREATGESLPDARAQARA
RAAAAPAQGGLFDAPAATSSALAAETPPAEDMAPSEIRYELVTTEAAFEAWMQRIESAPL
TAIDTETTSLDPMLAQLVGISLSVEPGEACYIPVGHRGPDVAGMENNGQLSRDTVLARMR
AWLEDDSKPKLGQNIKYDIHVFANHGVTLCGVAQDTMLESYVLASHRNHGMDSLAERLLN
LKTITYEEVCGKGASQIGFDQIDLARATEYAAEDADVTLRLHRKMFPQVSAAAGLRRVYE
EIEIPVSVVLQKIERNGVLIDAERLAAQSAELGQRMLSLEQAAYDAAGQPFNLGSPKQIG
EILFNQMKLPVVKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLAKLKSTYTDKLPKM
VNPNTGRVHTSYGQATAVTGRLASTEPNLQNIPVRTEEGRRIREAFIASPGSVIVSADYS
QIELRIMAHISGDENLLRAFANGEDIHRATASEIFGVDREAVSSEQRRYAKVINFGLIYG
MSAFGLASNLGIEREAAKHYIDRYFMRYPGVAQYMEDTRQTAREQGYVETVFGRRLWLPD
INGGSGPRRQAAERAAINAPMQGTAADLIKLSMIAVQGWLERDKLQTRQIMQVHDELVLE
VPQDELDVVKTRLPELMCSVAQLRVPLVAEVGSGANWEEAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagtccaaaaacactcttgctcgtcgatggatcgagctatttgtatcgcgct
tatcacgcgctgccggacctgaggaatggtgagggtctgcccacaggggcaatctacggc
atgatcaatatgctgcgcaagctgcgcaacgattacccggcagagtatagcgcctgcgtg
ttcgacgccaagggcaagacctttcgcgacgagatgtatcccgcgtacaaggaacaccgc
ccgtcgatgcccgaggatctggcccgccagatcgagccgatccacgaagcggtgcgtgct
ctgggctggccgatcgtcgtggtggaaggcgtggaggccgacgacgtgatcggcacgctt
gcgcggcaggccgccgagcagggggtgcgcacggtggtctccaccggcgacaaggatctg
gcgcagctcgtcaatgaccaggtcacgctggtcaacaccatgagcggcgaagtgctcgat
ccggccggcgtgaatgcgaagttcggcgtgccgcccgaacgtatcgtcgactatctgtcg
ctgatcggcgatgccgtggacaacgtgccgggcgtgcccaaggtggggcccaagacggcc
gtcaaatggctgaccgaacacggcacgctcgacaacatcatggcgggcgcagccggcatc
aagggcgtggtcggcgagaatctgcgcaacacgctggactggctgccgaaggcgcgcgaa
ctggtcaccgtcaaaaccgactgcgacctcagcgcggccgtggcggatttccacgcgctc
cgggaaatcggcgaggataaggaaaagctcatcgcattctttacgcgatacggtttcaag
acctggctgcgtgaggcgaccggcgaaagccttcccgatgcgcgcgcgcaagcgcgggcg
cgcgctgccgcggcacccgcgcaaggcggactgtttgatgcgccggccgccacctcgtct
gccttggcagccgagaccccgcctgccgaagacatggccccgagcgaaatccgatacgag
ctggtgacgaccgaagccgcgttcgaagcgtggatgcagcgcatcgaaagcgcaccgctg
acggcgatcgatacggagaccacgtcgctcgacccgatgctcgcgcagctggtcggcatc
tcgctgtcggtggagcccggcgaggcgtgctacatccccgtcggtcaccgtggcccggac
gtcgccggcatggagaacaacggccagctctcgcgcgataccgtgctcgcacgcatgcgc
gcatggcttgaggatgacagcaagcccaagctcggccagaacatcaagtacgacatacat
gtgttcgccaaccatggcgtgaccctgtgcggcgtggcgcaggacaccatgctggaaagc
tacgtgctggcgtcccatcgcaaccacggcatggacagcctggccgagcgcctgctgaac
ctgaagacgatcacctacgaagaagtctgcggcaagggcgcgagccagatcggcttcgac
cagatcgacctcgcgcgcgccaccgaatacgcggccgaggatgccgacgtcacgctgcga
ctgcatcgcaagatgttcccgcaggtcagcgccgcggcgggcctgcgccgcgtgtacgag
gagatcgagatcccggtgtccgtagtgctgcagaaaatcgaacgcaacggcgtgctgatc
gatgcggaacgtcttgccgcgcagagcgccgaactggggcagcgcatgctgtcgctggag
caggccgcgtacgatgccgcgggccagccgttcaatctcggttcgcccaagcagatcggc
gagatcctgttcaaccagatgaagctgccggtggtcaagaagactgcgagcggcgcgccg
tcgacggacgaagaggtgctgcagaagctggccgaggattacccgctgccgaagctgctg
ctcgactaccgtggcctggcgaagctcaagtcgacctacacggacaagctgccgaagatg
gtcaacccgaacacgggacgcgtgcatacgagctatggccaggcgacagctgtgacgggc
cggctcgcgtcgaccgaaccgaacctgcagaacatccccgtacgcacggaggaaggccgc
cgcatccgcgaagcattcatcgcgtcgccgggcagcgtgatcgtatcggccgactattcg
cagatcgagctgcgtatcatggcccatatctcgggcgacgaaaacttgctgcgcgcgttc
gcgaatggcgaggatatccaccgcgccaccgcctccgagatcttcggcgtcgatcgagag
gctgtgagcagcgagcagcgccgctatgccaaggtcatcaacttcggcctgatctacggc
atgagcgcgttcggcctggcgagcaacctcggcatcgagcgcgaggcggcaaagcactat
atcgaccgctacttcatgcgctacccgggcgtcgcgcaatacatggaagacacgcgccag
actgcacgtgaacagggctatgtcgagaccgtgtttggacgacgcctgtggctgccggac
atcaacggcggcagcggcccgcgccgccaggcggcggagcgtgcggccatcaacgcgccg
atgcagggtacggcggcggacctgatcaagctgtcgatgatcgccgtgcagggctggctc
gaacgcgacaagctgcagacgcgccagatcatgcaggtgcacgatgaactggtgctcgaa
gtgccgcaggacgaactggacgtggtcaagaccaggttgcccgagttgatgtgttcggtc
gcgcaattgcgtgttccgctggttgcagaagtcggcagtggcgcgaactgggaagaagcc
cactga
DBGET
integrated database retrieval system
