Rickettsia felis: RF_0890
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Entry
RF_0890 CDS
T00252
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase FadB
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rfe
Rickettsia felis
Pathway
rfe00071
Fatty acid degradation
rfe00280
Valine, leucine and isoleucine degradation
rfe00310
Lysine degradation
rfe00362
Benzoate degradation
rfe00380
Tryptophan metabolism
rfe00640
Propanoate metabolism
rfe00650
Butanoate metabolism
rfe00907
Pinene, camphor and geraniol degradation
rfe00930
Caprolactam degradation
rfe01100
Metabolic pathways
rfe01110
Biosynthesis of secondary metabolites
rfe01120
Microbial metabolism in diverse environments
rfe01200
Carbon metabolism
rfe01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RF_0890 (fadB)
00650 Butanoate metabolism
RF_0890 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
RF_0890 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RF_0890 (fadB)
00310 Lysine degradation
RF_0890 (fadB)
00380 Tryptophan metabolism
RF_0890 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RF_0890 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RF_0890 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RF_0890 (fadB)
00930 Caprolactam degradation
RF_0890 (fadB)
Enzymes [BR:
rfe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RF_0890 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RF_0890 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RF_0890 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_2
ECH_1
NAD_Gly3P_dh_N
NAD_binding_2
UDPG_MGDP_dh_N
ApbA
DAO
F420_oxidored
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AAY61741
UniProt:
Q4UL32
LinkDB
All DBs
Position
complement(951544..953706)
Genome browser
AA seq
720 aa
AA seq
DB search
MQNEIKKVCVIGSGVMGSGIAALIANSSHKVVLLDIIAKDSDDPNKIVKTAKENLHKQKP
PPLSFPDKVNFITIGNLEHDLELIRDCDLVIEVIVEKLEIKHQLYNKIIPYLKEDAIIAS
NTSTLPLKRLKENLPDNIKSRFVITHFFNPPRYMELLELIIDSMVKFEVIERVSGFLTKT
LGKTIVKCNDTPGFIANRVGCFLLELVARKAISQKLDFVALDKIFTICLGLPSTGIFGLY
DLIGHDVMKLISSSLLAALPANDAYHKIYVNTPVLDKMIEKKLIGRKGEGGFYRLSVSNG
KKIKEVININDLSYSSVQKVDISFNNLDELLVSDSVYGKIFTEIITEFYVYLASLVPSVT
DNIYDIDAAMKLGYSWKYGPFELLTIAAKDGWNSVIKNADLMHIPLPQYLGNKEYQKIDK
QKFNSHKDILQESQIVLENDSAKLINYRENFIFVITTKMNCLNHNVFYLLQEAASKAEKD
GKNLYIYPQGNNFSAGADLKLLLSYIEDGNFHDLENLLKLGQQTMLHLKYSGVHIISCAK
GVALGGGCELLLYSSYIVANQELNAGLVELGVGLIPGWGGVTEMFVRSKGDKTKLIRNVR
NIIEQNKTSSADYFKSDYDVESMHVNMNKHYILDEALKLNLSKKIVPIPHKITLPKINLA
TEIDTSKYNDLQNKVLSKFQNIIDKHPDTNEEELLGYEREIFLELAKDPKTIEKLKAIVK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatgaaataaaaaaagtttgtgttatcggttcgggagtaatgggttcagggatt
gcagcgttaattgctaattcctctcataaagtagtgctgcttgatattatcgctaaagat
tccgatgatccgaataaaatagttaaaaccgctaaagaaaatttgcataaacaaaaacct
cctcctttgtcttttccggataaagtaaatttcattaccatcggcaatttagaacatgat
ttagaattaattagggattgtgatttagtaattgaagttattgttgagaagctagaaatc
aaacaccaattatataataaaattattccttatcttaaagaagatgcaattattgcttct
aatacctctacattacctcttaaaagactcaaagagaatttaccggataatattaaatct
agattcgttattacgcatttcttcaatccgccaagatatatggaactgcttgaattaatt
atagactcgatggtaaagtttgaagtaatagaaagagtatcaggattcttaacgaaaact
cttggtaagactatagtaaaatgtaatgatacgcctggctttattgctaatagagtaggg
tgttttttacttgaattagtagctcgcaaagcgataagtcaaaagcttgattttgtagct
ttagataaaatatttactatatgtttggggttgccgagtaccggaatttttggtttatat
gatctaatcgggcatgacgtaatgaagttaatatcaagctcattacttgccgcacttcct
gcaaatgatgcttatcataaaatatatgtaaatactcctgttctcgataagatgatagag
aagaagttaattggacgtaagggtgaaggtgggttttatcgtttatcggtatcaaacggc
aaaaagattaaagaagttatcaatataaacgatttatcatatagttctgttcaaaaagta
gatatttcatttaataatcttgacgagttactagttagcgattcggtttacggtaaaatt
tttactgaaattatcacggaattttatgtttatttagcaagtttagtaccatctgtaacc
gataatatctatgatatcgatgctgctatgaagcttggttacagctggaaatacggtcca
tttgaattattgaccatagcagctaaagacggctggaattcggtaattaaaaatgccgat
ttaatgcatatcccgcttccgcaatatttaggcaataaagaatatcaaaaaatcgataaa
caaaaatttaattctcacaaagatattttacaagaaagtcagatagtattagaaaacgat
tctgcaaagctaataaattatcgtgagaatttcatttttgttattactacaaaaatgaat
tgtttaaaccataatgtgttttatttactgcaagaagcagcaagtaaagccgaaaaggac
ggcaaaaatctttatatttatccgcaaggaaataatttttctgccggtgcggatttaaag
cttcttctttcttatattgaagacggtaattttcatgatctagagaatttactaaagctg
ggacagcaaactatgctgcacttaaaatattctggggttcatattattagttgtgctaaa
ggagtagcacttggcggagggtgtgagctgctattgtactcaagctatattgtggcaaat
caggaacttaacgccggacttgtagaacttggagtcggtttaataccgggatggggcggt
gttactgaaatgtttgtacgaagcaagggagataaaactaaattaattagaaatgtcaga
aatattatagagcagaataaaacaagttcagccgattattttaaatcagattatgatgta
gagagtatgcacgtaaatatgaataagcattatattttagatgaagctttaaaattaaac
ctatctaaaaagatagtaccgattccgcataaaattactttgcctaaaataaatttagca
acagaaatagatacatcaaaatataacgatctacaaaataaggtacttagcaaattccaa
aatattattgataagcatcctgacacaaatgaggaagagttgcttggctatgagcgggaa
atatttttagaacttgcaaaagatcctaagactatagaaaagttaaaagcgattgtgaag
tga
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