Roseomonas fluvialis: Rmf_36870
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Entry
Rmf_36870 CDS
T08992
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rmf_36870 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfl01007
]
Rmf_36870 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfl03016
]
Rmf_36870 (lysS)
Enzymes [BR:
rfl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Rmf_36870 (lysS)
Amino acid related enzymes [BR:
rfl01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Rmf_36870 (lysS)
Transfer RNA biogenesis [BR:
rfl03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Rmf_36870 (lysS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
BDG73758
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Position
complement(3836105..3837733)
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AA seq
542 aa
AA seq
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MTTNPPVDLSAVKAWPFEEARKVAARLAKSGKGSALFETGYGPSGLPHIGTFGEVARTSW
VRRAFTLLTGLPSRLIAFSDDMDGLRKVPDNVPNKEMLAQHLGRSVTAIPDPFGTHESFG
HHNNARLRAFLDAFGFDYEFASSTDYYRSGRFDDALIRMAERHDAVRDVILPTLGPDRRA
TYSPFLPIHPKTGVVMQVPMEEVRPAEDLLIWRDPADGTRHATRITGGHCKAQWKADWAL
RWYALGVDYEMSGKDLIDSVRLSSAICRVLGADPPEAFTYEHFLDEQGQKISKSKGNGLT
IDEWLRYAPAESLSQYMYNQPQRAKRLFFDQIPRAVDEYLQHRARLRVAPDATNPAWHIH
GGAAPNDPEPPVSFTMLLNLASVVNADDPQILWGFLARYAPGTTPATQPMLGKLVEHAVH
YYRDFVAPTKRFRIPTAPEREALAALMAALRDRAPDLEAMPPEDRAKAIQDLVYDAGRRE
PFLQANKDGTTGVSRAWFNALYQVLLGQEEGPRFGGFVALYGIAGTIGLIETALARTEQP
AA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccaacccgcctgttgatctctccgccgtgaaggcctggcccttcgaggaagcg
cgcaaggttgccgcgcggctggcgaaatccggcaaggggtccgcgctgttcgagaccggc
tacgggccgtccggcctgccgcatatcggcaccttcggggaggtggcgcgcacatcctgg
gtgcggcgcgccttcacgctactgaccggtctgccatcgcgcctgatcgccttcagcgac
gacatggacgggctgcgcaaggtgccggacaacgtgccgaacaaggaaatgctggcgcag
cacctgggccgttcggtcaccgcgatcccggacccgtttggcacgcatgagagcttcggg
caccacaacaatgcgcggctgcgggcgttcctcgatgccttcggcttcgactacgaattc
gcgtcgagcaccgactattaccggtccgggcgcttcgacgacgcgctgatccgcatggcg
gaacgccatgatgcggtgcgcgacgtgatcctgccgacgctcggacccgaccgccgcgca
acctattcgcccttcctgccgatccatccgaagaccggcgtggtgatgcaggtgccgatg
gaggaggtgcgcccggccgaggacctgctgatctggcgcgacccggccgatggcacgcgc
cacgccacgcgcatcaccggcgggcattgcaaggcgcagtggaaggcggattgggcgctg
cgctggtatgcgctgggcgtcgactacgagatgtcgggcaaggacctgatcgattccgtg
cggctttcgtccgcgatctgccgcgtgctgggtgcggatccgccagaggccttcacctac
gagcacttcctcgatgagcagggccagaagatcagcaagtcgaagggcaacggcctgacc
atcgacgaatggctgcgctacgcgccggccgagagcctgagccagtacatgtacaaccag
ccacagcgcgccaagcggctgttcttcgaccagatcccgcgcgcggtggatgaatatctg
cagcatcgcgcgcggctgcgcgtggcccccgatgcgaccaaccccgcctggcacatccat
ggcggcgcggcgccgaacgacccggagccgccggtatcgttcaccatgctgctgaacctg
gcgtcggtggtgaatgccgacgacccgcagatcctgtggggcttccttgcgcgctacgcg
ccagggaccacgccggccacgcaaccgatgctgggcaagctcgttgagcacgccgtgcac
tactaccgggacttcgtggcacccacgaagcgcttccgtattccgaccgcgcccgagcgc
gaggcgctggcggcgctgatggcggcgctgcgcgatcgcgcgcccgacctcgaggccatg
ccgccggaggatcgcgcgaaagccatccaggacctcgtctatgatgccggccggcgcgag
cccttcctgcaggccaacaaggacgggaccacgggcgtctcgcgcgcctggttcaatgcg
ctgtaccaggttttgctgggccaggaggaaggcccgcgcttcggcggctttgtcgcgctc
tatggcatcgcggggaccatcgggctgatcgagacggcgctcgcgcgcacggagcagccg
gccgcgtga
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