Roseomonas fluvialis: Rmf_47470
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Entry
Rmf_47470 CDS
T08992
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00540
Lipopolysaccharide biosynthesis
rfl01100
Metabolic pathways
rfl01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Rmf_47470 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rfl01005
]
Rmf_47470 (hldD)
Enzymes [BR:
rfl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Rmf_47470 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
rfl01005
]
Core region
Rmf_47470 (hldD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Pyr_redox
adh_short
UDPG_MGDP_dh_N
Pyr_redox_2
ApbA
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
BDG74818
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All DBs
Position
4942254..4943237
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AA seq
327 aa
AA seq
DB search
MHIVTGGAGFIGSNLVAALCAAGQEVVVVDRLRQGLKWRNLAKHAIAGIVAPDDLPAFLA
KKPRVDALFHMGAISATTETDGDLVARTNIALPQMLWDWCAAAGVPFIYASSAATYGDGA
LGFDDDLSAEALMRLRPLNLYGWSKLAFDRRVAQMLAQGAPRPPHWAGLRFFNVYGPNEH
HKGRMASVVLHKFNQVMRGEAATLFASDREGIADGAQQRDFVHVSDCVAAMTWLARNPQA
SGLYNIGSGTARTFLDLTRAIFAALGRNDDIRFVPMPDDLRGKYQYFTQARMDRLRAAGF
DHKPTSIEDGVRSYVRDVLMNAEDPFA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcgtcaccggcggcgccgggttcatcggctccaacctggttgcggcactctgc
gccgctggtcaggaagtggtggtggtggaccgcctgcgccagggcctgaagtggcgcaac
cttgcaaagcatgccatcgccgggatcgtggcacccgacgacctgcccgccttcctcgcg
aagaagccgcgcgtcgacgcgctgtttcacatgggcgcgatcagcgccaccaccgagacc
gatggcgacctggtggcgcgcaccaacatcgcgctgccgcagatgctgtgggactggtgc
gcggcagccggcgtgccgttcatctacgcgtcctcggccgcgacctatggcgacggggcg
ctgggcttcgacgacgacctgtcggccgaggcgctgatgcggctgcggccgctgaacctg
tatggctggtcgaaactggccttcgaccggcgggtggcgcagatgctggcgcagggtgcg
ccgcgtccgccgcactgggcgggactgcgcttcttcaacgtctatgggccgaacgaacac
cacaagggccgcatggcgtccgtcgtgctccacaagttcaaccaggtgatgcgcggggag
gccgccacgctgttcgcctcggaccgcgagggtatcgccgatggcgcgcagcagcgcgac
ttcgtgcatgtgagcgactgcgtcgcagcgatgacgtggctcgcgcgcaacccgcaggcc
tcggggctgtacaacatcggctcgggcacggcgcggaccttcctcgacctcacgcgcgcg
atcttcgcggcactcgggcggaatgacgacatccgcttcgtgcctatgcccgacgacctg
cgcggcaagtaccagtacttcacgcaggcccgcatggaccgcctgcgcgccgccggcttc
gaccacaagcccaccagcatcgaggacggcgtgcggtcctatgtgcgcgacgtgctgatg
aacgccgaggaccccttcgcctga
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