Rhinolophus ferrumequinum (greater horseshoe bat): 117013079
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Entry
117013079 CDS
T07722
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03020
RNA polymerase
rfq03420
Nucleotide excision repair
rfq05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117013079 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
117013079 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
117013079 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfq03021
]
117013079 (POLR2A)
03400 DNA repair and recombination proteins [BR:
rfq03400
]
117013079 (POLR2A)
Enzymes [BR:
rfq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117013079 (POLR2A)
Transcription machinery [BR:
rfq03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117013079 (POLR2A)
DNA repair and recombination proteins [BR:
rfq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117013079 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
117013079
NCBI-ProteinID:
XP_032945687
Ensembl:
ENSRFEG00010013267
LinkDB
All DBs
Position
21:complement(11379536..11404103)
Genome browser
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcatgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaaaaga
gtgcagttcggagtcctcagtccggatgaactgaaacgaatgtctgtgacagaggggggt
atcaagtaccccgagacaactgagggaggccgccccaagcttgggggtcttatggatcca
aggcagggggtgatagagcggactggccgctgccagacatgtgcaggaaacatgacggaa
tgtcctggccactttggccacatcgagctggccaaacctgtgtttcatgtgggcttcctg
gtgaagacaatgaaagttttgcgctgcgtctgcttcttctgctccaagttacttgtggac
tctaacaacccgaagatcaaggacattttggctaagtccaaggggcagcccaagaagcgg
ctcacacacgtctatgacctctgcaagggcaaaaatatctgcgagggcggggaggagatg
gacaacaagtttggcgtggagcagcccgagggtgatgaggatttgaccaaagaaaagggc
catggtggctgtgggcggtaccagcccaggatccgccgctcaggcctggagctgtatgca
gagtggaagcatgttaatgaggactctcaggagaagaagatcctgctgagtcctgagcga
gtccatgagatcttcaaacgcatctccgatgaggagtgttttgtgctgggcatggagcca
cgctatgcccggcctgagtggatgattgtcacggtgctacctgtgcctcccctgtctgtg
cggcctgctgtcgtgatgcagggctctgcccgtaaccaggatgacctgactcacaaactg
gctgacatcgtgaagatcaacaatcagcttcggcgcaatgagcagaacggcgcagcggcc
catgtcattgcagaggatgtgaagctcctccagttccatgtggccaccatggtggacaat
gagctgcctggcttgcctcgtgccatgcagaagtctgggcgtcccctcaagtccctgaag
cagcggttgaagggcaaggaaggccgggtgcgagggaacctgatgggcaagcgagtggac
ttctcggctcgcactgtcatcacccccgatcccaacctctccattgaccaggttggcgtg
cctcgctccattgctgccaacatgacctttgcggagattgtcacccccttcaacattgac
agacttcaggaactagtgcgcaggggcaacagccagtacccgggggccaaatacatcatt
cgagataatggcgatcgcattgacctgcgtttccaccccaagcccagtgaccttcacctg
cagactggctataaggtggaacggcacatgtgcgatggggacattgttatcttcaaccgg
cagccaactttgcacaaaatgtccatgatggggcatcgggttcgcatcctcccgtggtct
acttttcgcttgaaccttagtgtgacaactccatacaatgccgactttgatggggatgag
atgaacttgcacctgccgcagtcgttggagacgcgggcagagatccaagaactcgccatg
gtgccacgcatgattgtcaccccccagagcaatcgccctgtcatgggcatcgtgcaggac
actctcaccgcagtgcgcaaattcaccaagagagacgtcttcctggagcggggtgaagtg
atgaacctcctgatgttcctgtccacgtgggatgggaaggtgccccagccagccatcctg
aagccccggcccctgtggacaggcaaacagatcttttccctcatcataccaggccacatc
aactgtatccgcacccacagcacccatcctgacgatgaggacagtggcccttacaagcac
atctctcctggggacaccaaggtggtagtggagaacggggagctgattatgggcatcctg
tgtaagaagtctttgggcacgtcggcgggctccctggtccacatctcttacctagagatg
ggtcacgacatcactcgcctcttctactccaacattcagactgtcattaacaactggctc
ctcatcgagggtcataccattggcatcggggactccattgctgattctaagacttaccag
gacattcagaacactattaagaaggccaaacaggatgtaatagaggtcattgagaaagct
cataacaacgagctggagcccaccccagggaacactctgcggcagacatttgaaaaccaa
gtgaaccgcattctcaacgatgctcgagacaagactggctcctctgctcagaaatccctg
tctgaatacaacaactttaagtctatggttgtgtctggagcgaaaggttccaaaattaac
atctcccaggtcattgctgtcgtcgggcagcagaacgtggagggcaagcggattccattt
ggattcaagcaccggactctgcctcacttcatcaaggacgactatgggcctgagagccgt
ggctttgtggagaactcctacctggccggcctcacacccaccgagttctttttccatgcc
atggggggtcgtgaggggctcatcgacacagccgtgaagactgctgaaactgggtacatc
cagcggcggctgatcaagtccatggagtcggtgatggtgaagtatgatgcgaccgtgcgg
aactccatcaaccaggtggtacagctgcgctacggcgaggacggcctggcgggcgagagt
gttgagttccagaacctggctacccttaagccttccaacaaggcttttgagaaaaagttc
cgctttgattataccaacgagagggccctgcggcgcactctgcaggaggatctggtgaag
gatgtgctgagcaatgcgcacattcagaacgagctggagagagaatttgagcggatgcgt
gaggatcgggaggtgctcagggtcatctttccaactggcgacagcaaggttgtcctcccc
tgtaacctgctgcgcatgatctggaatgctcagaaaatcttccacataaaccctcgcctt
ccctccgacctgcaccccatcaaggtggtagagggagtcaaggaattgagcaagaagctg
gtgattgtgaatggtgatgacccactgagccggcaggctcaggaaaatgccacactgctc
ttcaacattcatcttcgatccacactgtgctcccgccgcatggctgaggagtttcggctg
agtggagaggccttcgactggctgcttggagagatcgagtccaagttcaaccaagccatt
gcccatcctggggaaatggtgggagctctggctgcacagtcccttggagaacctgcaacc
cagatgaccttgaacaccttccactatgctggtgtgtctgccaagaacgtgacactgggt
gtgccccgacttaaggagctcatcaacatttctaagaagccaaagaccccctcacttacc
gtcttcctgctgggccagtctgctcgagatgctgagagagccaaggacattctgtgccgc
ctggaacatacaacattgaggaaggtgactgccaacacagccatctactatgaccccaac
ccgcagagcacagtggtggcggaggatcaggaatgggtgaatgtctactacgagatgcct
gactttgatgtggcccgaatctccccctggcttttgcgggtggagctggaccggaagcac
atgactgataggaagctcaccatggaacagattgctgaaaagatcaatgctggttttggt
gacgacttgaattgcatctttaatgatgataatgcagagaagctggtgctccgtatccgc
atcatgaacagtgatgaaaacaagatgcaagaggaagaagaggtggtggacaagatggat
gacgacgttttcctgcgctgcatcgagtccaacatgctgacagatatgaccctgcaggga
atcgagcagatcagcaaggtgtacatgcacttgccgcagacagacaacaagaagaagatc
attatcacagaggatggggaattcaaggccctgcaggagtggattctggagacggacggt
gtgagcttaatgcgggtgctgagtgagaaggatgtggaccccgtgcgcaccacatccaat
gacattgtggagatcttcacggtgctgggtatcgaagctgtgcggaaggccctggagcgg
gagctttaccatgtcatctcttttgatggttcctacgttaattaccggcacttggctctc
ttgtgtgataccatgacttgtcgtggccacttgatggccatcacgcgacatggagtcaac
cgccaggatacaggacctctcatgaaatgctcctttgaggaaacggtggatgtgcttatg
gaagcagctgcacatggtgagagcgaccccatgaagggggtgtctgagaatatcatgctg
ggccagctagctccagctggcactggctgttttgacctcctgcttgatgcagagaagtgc
aaatatggcatggagatccccaccaatattcctggtttgggagctgctggacccactggc
atgttcttcggctcagcacccagtcccatgggaggaatttctccagccatgacaccctgg
aaccagggtgcaaccccagcctacggtgcctggtcccccagtgttgggagtggaatgacc
ccgggggctgctggcttctctcccagtgctgcttcagatgccagtggcttcagccctggt
tactcccctgcctggtctcccacgccgggctccccaggctcaccaggcccctcgagcccc
tacatcccatcaccaggtggtgccatgtctccgagctattcaccaacatcgcctgcctat
gagccccgctcccctgggggctacacaccccagagtccctcttactcccccacttcaccc
tcctactcccctacttccccatcctattctccaactagtcccaactacagtcccacgtca
cccagctactcaccaacttctccgagctactcgccaacctctcccagctattccccgacc
tcccccagttattcacccacctctcccagctattctcccacttcaccaagctactcgccc
acatcacccagctactcaccaacctctcccagctactcgcccacgtctcccagctactca
ccaacgtctcccagttactcaccaacatcacccagctattctcccacttctcccagctac
tcaccaacatctccgagctattctccaacatcaccaagctactcaccaacttccccaagt
tactcccccactagccctaactattctccaaccagtcccaattacaccccgacgtcaccc
agctatagcccaacgtcacccagctactcaccgaccagtcccaattacacgccaacaagc
cctaactacagcccaacctctcccagctactctccgacttctcccagctactctccgacc
tcaccaagttactccccttcaagcccacggtacacaccacagtctccaacctataccccg
agctctcccagctacagccccagctctcccagctacagccctacctcaccaaagtatacc
ccaaccagcccttcctacagtcccagctcaccagagtataccccaacctctcccaagtat
tcacctaccagcccgaaatattcacccacctctcccaagtattctcctactagccccacc
tattcgcccaccaccccgaaatactcgccaacatctcctacttactcacccacctctcct
gtgtataccccaacctcacccaagtactcacctactagccccacttactcacccacctcc
cccaagtactcacccaccagccctacctactcgcccacctcccccaaaggctctacctac
tcgcccacttcccctggctactcacccaccagccccacctatagcctcaccagcccggcc
atcagcccggatgacagtgatgaggagaactaa
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integrated database retrieval system
