Rhinolophus ferrumequinum (greater horseshoe bat): 117013881
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Entry
117013881 CDS
T07722
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq04721
Synaptic vesicle cycle
rfq04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
117013881 (SLC6A4)
04721 Synaptic vesicle cycle
117013881 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfq02000
]
117013881 (SLC6A4)
Transporters [BR:
rfq02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117013881 (SLC6A4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
117013881
NCBI-ProteinID:
XP_032947315
Ensembl:
ENSRFEG00010011698
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All DBs
Position
21:17647262..17670400
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AA seq
630 aa
AA seq
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METTPLNSQKELSVCKDGEDCQENGILQKGVPTPENKVESGQISSGYLVAPSPSAGDDTQ
RSVPAATAVLEAEVHEGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYLSEENITWTPHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILLVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHVWSKRREGLVLGVVVTCFFGSLIT
LTFGGAYVVKLLEEYATGPAVLTVALIEAIAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYSYPHWSIILGYCIGTSSFICIPTYIIYRLIIT
PGTFKERIIKSITPETPTEIPCGAIRLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacctttaaattcccagaaggagctgtcggtgtgtaaggatggagaagat
tgtcaggaaaatggaattctacagaagggtgtccccacccctgaaaacaaggtggagtct
ggccaaatctccagtgggtacttggtggcaccaagccccagtgcaggagatgacactcag
cgctccgtcccagctgccactgcggtcctagaggctgaggttcatgagggggaacgggag
acctggggcaagaagatggatttcctcctgtcagtcattggctacgccgtggacctgggc
aacgtctggcgctttccctacatatgttaccagaatggagggggggcgttcctcctcccc
tacaccatcatggccatctttggggggatcccactcttctacatggagctcgcgctgggc
cagtaccaccgaaatggatgcatttcaatatggaggaaaatctgcccgattttcaaaggg
atcgggtacgccatctgcatcattgccttttatatcgcctcctactacaacaccatcatg
gcctgggcactctactacctcatctcctccttcacggaccagctgccctggaccagctgc
aagaactcctggaacaccggcaactgcactaactacttgtctgaggaaaacatcacctgg
acaccccactccacgtcccctgcggaggagttttacacgcgccacgtcctacagatccat
cggtcaaagggactccaggacctggggggcatcagctggcagcttgccctctgcatcatg
ctgatcttcactgttatctactttagcatctggaaaggtgtcaaaacatctggcaaggtg
gtgtgggtgacagccacctttccttacatcatccttttggtcctgctggtgaggggggcc
accctccccggagcctggagaggtgttctcttctacctgaaacccaactggcagaaactc
ctggagacaggggtgtgggtggatgccgccgctcagatcttcttctctcttggtcctggc
tttggggtcctcctggcttttgctagctataacaaattcaacaacaactgttatcaagat
gccctggtgaccagtgtggtgaactgcatgacgagcttcgtctcgggatttgtcatcttc
acggtgctcgggtatatggctgagatgaggaacgaagacgtgtccgaggtagccaaagac
gcaggccccagcctcctcttcatcacgtatgcagaagccatagccaacatgccggcgtcc
acgttctttgccatcatcttcttcttgatgttaatcacactgggcttggatagcacgttt
gcaggcttggagggagtgatcacggctgtgttggatgagttcccgcacgtctggtccaag
cgccgggaggggttagtgctcggtgtggtcgtgacctgcttctttgggtccctgatcacc
ctaacttttggaggggcctacgtggtgaagctgctggaggagtacgccacggggcccgca
gtgctcaccgtcgcactgatagaagcaatcgctgtgtattggttctatggcatcactcag
ttctgcagtgatgtgaaggaaatgctcggcttcagtcctggatggttttggaggatctgc
tgggtagccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagcccg
ccacagctacgacttttccagtatagttatcctcactggagtatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatataatttaccggctgatcatcact
ccagggacatttaaggagcgtattattaaaagtatcactccagaaacaccaacagaaatt
ccctgtggggctatccgcttgaatgctgtttaa
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