Rhinolophus ferrumequinum (greater horseshoe bat): 117028935
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Entry
117028935 CDS
T07722
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4
KO
K06454
T-cell surface glycoprotein CD4
Organism
rfq
Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03250
Viral life cycle - HIV-1
rfq03260
Virion - Human immunodeficiency virus
rfq04060
Cytokine-cytokine receptor interaction
rfq04514
Cell adhesion molecules
rfq04612
Antigen processing and presentation
rfq04640
Hematopoietic cell lineage
rfq04658
Th1 and Th2 cell differentiation
rfq04659
Th17 cell differentiation
rfq04660
T cell receptor signaling pathway
rfq05135
Yersinia infection
rfq05166
Human T-cell leukemia virus 1 infection
rfq05170
Human immunodeficiency virus 1 infection
rfq05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
rfq05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
rfq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117028935 (CD4)
03260 Virion - Human immunodeficiency virus
117028935 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117028935 (CD4)
04514 Cell adhesion molecules
117028935 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
117028935 (CD4)
04612 Antigen processing and presentation
117028935 (CD4)
04660 T cell receptor signaling pathway
117028935 (CD4)
04658 Th1 and Th2 cell differentiation
117028935 (CD4)
04659 Th17 cell differentiation
117028935 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
117028935 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
117028935 (CD4)
05170 Human immunodeficiency virus 1 infection
117028935 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
117028935 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
117028935 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
rfq04090
]
117028935 (CD4)
CD molecules [BR:
rfq04090
]
Proteins
117028935 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
C2-set
Tcell_CD4_C
ig
V-set
Ig_3
Ig_2
I-set
Receptor_2B4
Izumo-Ig
PD40
Motif
Other DBs
NCBI-GeneID:
117028935
NCBI-ProteinID:
XP_032973682
Ensembl:
ENSRFEG00010003064
LinkDB
All DBs
Position
10:23984577..24002713
Genome browser
AA seq
463 aa
AA seq
DB search
MNGGTSFRNLLPLLQLALFPVVIQGQELVLGEAGGMAELPCKSPQKKSIYFSWKHSSGTM
ILGTQSSNSAPVLLVTGSSKLKDRVESKKLQWDTGSFPLIIKNLDMEDSGTYHCELEGRT
TKVQLMVFKLNPNLGNKSPICLLPGESLTMTLESPPGSDPLVEWKDPGNITHKEGKSFSL
SQRELQKSGTWTCTVSKDGKTLAFSRNINMLAFKKVSDTVYAKEGEQVEFSLGLTCENIN
LKGELKWQKEGASSPKSCISFSLENKKVSVNVHQDCKFQMKETLPFYISLPQASHQDAGS
GNLTLLLSKRQLHQEVKLVMMRMTKSQNHLTCEVLGPLSRNLMLRLKLEDQDVKFSNQQK
KVEMQDPDSGTWQCLLSDKDKVLLESKVEVLPTVFTWASPKLLASVLGGIAGFLIFTGFC
IFCCVKCWHRRRQAERMSQIKRLLSEKKTCQCPHRFQKTCSLI
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaggaacctcttttaggaacctgcttccgctgctgcaactggccctgttccca
gtggtcattcagggacaagaactggtgctgggtgaggcaggaggcatggcagagctgccc
tgcaagtctcctcagaagaaaagcatttacttcagctggaaacattcttctgggaccatg
attctgggaactcagagctccaattccgcaccagtactcttggtgacaggttcctccaag
ctgaaagaccgtgtcgaatcaaaaaaactccagtgggacacaggatcctttcctctgatc
atcaagaatcttgacatggaagactcagggacttaccactgtgaattggagggcaggaca
acaaaggtgcaattgatggtattcaaattgaatcccaatttgggcaacaaaagccccatc
tgcttactgcctggggaaagcctgaccatgaccttggagagccctcctggtagtgaccct
ttagtagaatggaaagatccagggaatataacgcataaagagggcaagagcttctcactg
tcccagcgagagctgcagaagagtggcacctggacatgcaccgtttccaaggacgggaag
acactggcgttcagcagaaacatcaacatgctggctttcaagaaggtctctgacacagtg
tatgcaaaagagggggagcaagtggagttctccttaggacttacctgtgaaaatataaac
ctgaaaggagagctgaagtggcagaaggagggggcatcatcccctaagtcctgcatcagc
ttctccttggagaacaagaaggtgtctgtgaacgttcaccaagactgcaagttccagatg
aaggaaaccttaccgttctacatcagcctgccccaggcctcacatcaggatgctggttct
ggaaacctgaccctgcttctcagcaagaggcagttgcatcaggaagtgaaacttgtgatg
atgagaatgactaagtcccagaaccatttgacctgtgaggtgctggggcccctctcccgc
aacctgatgctgaggttgaagctggaggaccaggatgtaaagttctcaaatcaacaaaag
aaagtggagatgcaggaccctgattcagggacatggcagtgtctactgagtgacaaggac
aaagtcctgctggaatccaaggtcgaggttttgcctactgtattcacctgggcctcgcca
aagctcctggccagtgtgctggggggaattgcaggcttcctgattttcactgggttctgt
atcttctgctgtgtcaagtgctggcaccgcaggcgccaggcagagcggatgtctcagatc
aagagactcctcagtgagaagaagacctgccaatgccctcaccggttccagaagacatgt
agtctcatttga
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