KEGG   Rhinolophus ferrumequinum (greater horseshoe bat): 117028935
Entry
117028935         CDS       T07722                                 
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4
  KO
K06454  T-cell surface glycoprotein CD4
Organism
rfq  Rhinolophus ferrumequinum (greater horseshoe bat)
Pathway
rfq03250  Viral life cycle - HIV-1
rfq03260  Virion - Human immunodeficiency virus
rfq04060  Cytokine-cytokine receptor interaction
rfq04514  Cell adhesion molecules
rfq04612  Antigen processing and presentation
rfq04640  Hematopoietic cell lineage
rfq04658  Th1 and Th2 cell differentiation
rfq04659  Th17 cell differentiation
rfq04660  T cell receptor signaling pathway
rfq05135  Yersinia infection
rfq05166  Human T-cell leukemia virus 1 infection
rfq05170  Human immunodeficiency virus 1 infection
rfq05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
rfq05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:rfq00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117028935 (CD4)
   03260 Virion - Human immunodeficiency virus
    117028935 (CD4)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    117028935 (CD4)
   04514 Cell adhesion molecules
    117028935 (CD4)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    117028935 (CD4)
   04612 Antigen processing and presentation
    117028935 (CD4)
   04660 T cell receptor signaling pathway
    117028935 (CD4)
   04658 Th1 and Th2 cell differentiation
    117028935 (CD4)
   04659 Th17 cell differentiation
    117028935 (CD4)
 09160 Human Diseases
  09161 Cancer: overview
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    117028935 (CD4)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    117028935 (CD4)
   05170 Human immunodeficiency virus 1 infection
    117028935 (CD4)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    117028935 (CD4)
  09163 Immune disease
   05340 Primary immunodeficiency
    117028935 (CD4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:rfq04090]
    117028935 (CD4)
CD molecules [BR:rfq04090]
 Proteins
  117028935 (CD4)
SSDB
Motif
Pfam: CD4-extracel C2-set Tcell_CD4_C ig V-set Ig_3 Ig_2 I-set Receptor_2B4 Izumo-Ig PD40
Other DBs
NCBI-GeneID: 117028935
NCBI-ProteinID: XP_032973682
Ensembl: ENSRFEG00010003064
LinkDB
Position
10:23984577..24002713
AA seq 463 aa
MNGGTSFRNLLPLLQLALFPVVIQGQELVLGEAGGMAELPCKSPQKKSIYFSWKHSSGTM
ILGTQSSNSAPVLLVTGSSKLKDRVESKKLQWDTGSFPLIIKNLDMEDSGTYHCELEGRT
TKVQLMVFKLNPNLGNKSPICLLPGESLTMTLESPPGSDPLVEWKDPGNITHKEGKSFSL
SQRELQKSGTWTCTVSKDGKTLAFSRNINMLAFKKVSDTVYAKEGEQVEFSLGLTCENIN
LKGELKWQKEGASSPKSCISFSLENKKVSVNVHQDCKFQMKETLPFYISLPQASHQDAGS
GNLTLLLSKRQLHQEVKLVMMRMTKSQNHLTCEVLGPLSRNLMLRLKLEDQDVKFSNQQK
KVEMQDPDSGTWQCLLSDKDKVLLESKVEVLPTVFTWASPKLLASVLGGIAGFLIFTGFC
IFCCVKCWHRRRQAERMSQIKRLLSEKKTCQCPHRFQKTCSLI
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgaacggaggaacctcttttaggaacctgcttccgctgctgcaactggccctgttccca
gtggtcattcagggacaagaactggtgctgggtgaggcaggaggcatggcagagctgccc
tgcaagtctcctcagaagaaaagcatttacttcagctggaaacattcttctgggaccatg
attctgggaactcagagctccaattccgcaccagtactcttggtgacaggttcctccaag
ctgaaagaccgtgtcgaatcaaaaaaactccagtgggacacaggatcctttcctctgatc
atcaagaatcttgacatggaagactcagggacttaccactgtgaattggagggcaggaca
acaaaggtgcaattgatggtattcaaattgaatcccaatttgggcaacaaaagccccatc
tgcttactgcctggggaaagcctgaccatgaccttggagagccctcctggtagtgaccct
ttagtagaatggaaagatccagggaatataacgcataaagagggcaagagcttctcactg
tcccagcgagagctgcagaagagtggcacctggacatgcaccgtttccaaggacgggaag
acactggcgttcagcagaaacatcaacatgctggctttcaagaaggtctctgacacagtg
tatgcaaaagagggggagcaagtggagttctccttaggacttacctgtgaaaatataaac
ctgaaaggagagctgaagtggcagaaggagggggcatcatcccctaagtcctgcatcagc
ttctccttggagaacaagaaggtgtctgtgaacgttcaccaagactgcaagttccagatg
aaggaaaccttaccgttctacatcagcctgccccaggcctcacatcaggatgctggttct
ggaaacctgaccctgcttctcagcaagaggcagttgcatcaggaagtgaaacttgtgatg
atgagaatgactaagtcccagaaccatttgacctgtgaggtgctggggcccctctcccgc
aacctgatgctgaggttgaagctggaggaccaggatgtaaagttctcaaatcaacaaaag
aaagtggagatgcaggaccctgattcagggacatggcagtgtctactgagtgacaaggac
aaagtcctgctggaatccaaggtcgaggttttgcctactgtattcacctgggcctcgcca
aagctcctggccagtgtgctggggggaattgcaggcttcctgattttcactgggttctgt
atcttctgctgtgtcaagtgctggcaccgcaggcgccaggcagagcggatgtctcagatc
aagagactcctcagtgagaagaagacctgccaatgccctcaccggttccagaagacatgt
agtctcatttga

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