Rhodoferax ferrireducens: Rfer_0295
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Entry
Rfer_0295 CDS
T00334
Name
(GenBank) Extradiol ring-cleavage dioxygenase LigAB, LigA subunit
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00362
Benzoate degradation
rfr00627
Aminobenzoate degradation
rfr01100
Metabolic pathways
rfr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rfer_0295
00627 Aminobenzoate degradation
Rfer_0295
00624 Polycyclic aromatic hydrocarbon degradation
Rfer_0295
Enzymes [BR:
rfr01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
Rfer_0295
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Gene cluster
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Motif
Pfam:
LigA
BacteriocIIc_cy
Motif
Other DBs
NCBI-ProteinID:
ABD68050
UniProt:
Q222K3
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All DBs
Position
complement(296929..297282)
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AA seq
117 aa
AA seq
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MVSRTPLPQIPGTNPFDGELAKKGYALNKMCFSFNSAENRAEFKNDEEAYMRKYGLTKPQ
AAAIRAKNVLQLLDAGGNAYYLAKFAGIFGLDMQDIGAQQTGMTKEEFKAKLVAAGK
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
gtggtttcacgcacccccttgccgcaaattccgggcaccaacccgtttgatggcgaattg
gccaaaaaaggctatgcactcaacaagatgtgtttttcgttcaactcggccgagaaccgc
gccgagttcaaaaatgacgaagaagcctacatgcgcaaatacggtctgaccaaaccacag
gccgccgccatccgtgccaagaacgtgctgcaactgcttgacgcggggggcaatgcctac
tacctggccaaatttgccggcatttttgggctggatatgcaggacattggtgcgcagcaa
accggcatgaccaaagaagaattcaaggccaagctcgtggccgcaggcaaataa
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