Rhodoferax ferrireducens: Rfer_0330
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Entry
Rfer_0330 CDS
T00334
Name
(GenBank) Protocatechuate 4,5-dioxygenase
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00362
Benzoate degradation
rfr00627
Aminobenzoate degradation
rfr01100
Metabolic pathways
rfr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rfer_0330
00627 Aminobenzoate degradation
Rfer_0330
00624 Polycyclic aromatic hydrocarbon degradation
Rfer_0330
Enzymes [BR:
rfr01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
Rfer_0330
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
ABD68084
UniProt:
Q222G9
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All DBs
Position
complement(329282..330163)
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AA seq
293 aa
AA seq
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MAKITASVYTSHVPAIGAAIDLGKTQEPYWQPLFKGYEFSKQWMKDNKPDVIFLVYNDHA
TAFSLDMIPTFAIGTAAQFLPADEGFGPRPVPKVIGHPDLASHIAHSVIQQDFDLTIVNK
MEVDHGLTVPLSLMCGQPDAWPCPVIPFAVNVVQYPVPSGQRCFNLGKAIRKAVESYDQD
LKVQIWGTGGMSHQLQGPRAGLINKEFDNAFLDRLIADPQGQASVPHIDYVREAGSEGVE
LVMWLIARGAMDDVAGNAANSIATHAGSVRVRHRFYHVPASNTAVGHLILENI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaattaccgcctccgtttacacctcccacgtgcccgccatcggcgcggccatt
gacctgggcaagacacaagagccgtactggcagccgctgttcaagggttatgagttctcc
aaacagtggatgaaggacaacaagcccgacgtgatttttctggtctacaacgaccacgcc
accgccttcagcctggacatgattcccaccttcgccatcggcacggcggcgcaatttctt
cccgcagacgagggttttggcccgcgcccggtgcccaaagtcatcggccacccggacctg
gcatcgcacatcgcccactcggtgatccagcaggactttgacctgaccatcgtcaacaag
atggaagtcgaccacggcctgaccgtgccactgtccctgatgtgcggccagcccgatgcc
tggccctgcccggtgatcccgtttgccgtcaatgtggtgcagtacccggtgcccagcggc
cagcgctgcttcaacctcggcaaagccatccgcaaagcggttgaaagttatgaccaggac
ctcaaagtgcaaatctggggcaccggcggcatgagccaccagttgcaggggccgcgcgcc
ggcctgatcaacaaagagtttgacaacgcgtttctggaccgcctgattgccgacccgcaa
ggccaggccagcgtgccgcacatagactacgtgcgtgaagctggcagcgagggcgttgaa
ctggtgatgtggctcattgcccgtggtgcgatggacgacgtggcgggcaatgctgcaaat
agcatagctacacacgcaggtagcgtgcgggttagacaccgtttttatcatgttcccgcg
tccaatacggcggtgggtcatctgattttggagaacatctga
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