Rhodoferax ferrireducens: Rfer_1925
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Entry
Rfer_1925 CDS
T00334
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00280
Valine, leucine and isoleucine degradation
rfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Rfer_1925
Enzymes [BR:
rfr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
Rfer_1925
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABD69651
UniProt:
Q21X52
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Position
2067139..2068641
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AA seq
500 aa
AA seq
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MRAAFPPNLDALAIETDTGLLYSWRDLERATAMLANLLGSLDLPAGARIAVQVEKSVEAL
LLYLATLRAGFVFLPLNTAYQSAEMAYFIGNAEPAVVVCTDRNFGWISQLAFKAGTQHVF
TLNENRTGSLLARAAAQPDQHEVAFKHADELAAIIYTSGTTGRSKGAMLTHGNLLSNAQV
LKSYWGWRSLDEGGDVLLHALPIFHVHGLFVAIHGALLSGSQMIWLNQFDPKTVIKKLPE
ATVFMGVPTLYVRLLAEPGLTREVARHMRLFISGSAPLLIETFKAWQERTGHTILERYGM
SETAMITSNPYRESEGARRGGTVGLPLPGVSLRVQDDAGENVAAGEIGNIEVMGPNVFKG
YWHMPEKTAEEFTLDGFFKTGDVGKIDAQGYVTIVGRSKDLVISGGYNVYPAEVEGYINE
LPGVAESAVVGVPHADFGEVGVAVVVAKPGVALESARILVSLKATLANFKVPKQCFVVDA
LPRNSMGKVQKNVLREQYSA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgcagcattccctccaaacctcgacgcgctagcgattgaaaccgacaccggcctg
ctgtactcctggcgcgacctggagcgcgcgacggccatgctggccaacctgctcgggtcg
cttgacttgccagcaggtgcccgcatcgcggtgcaggtggaaaaatcggtcgaggcgctg
ctgctgtatctggcgaccttgcgcgccgggtttgtttttttgccgctcaacaccgcctac
caaagcgccgagatggcgtatttcattggcaatgcggaacccgccgtggtggtttgtacg
gatcggaattttggctggatcagccaactggcgttcaaggcgggcacgcagcatgtcttc
acgctcaatgagaatcgcaccggctcgctgctggcgcgcgccgccgcccagcccgatcag
catgaggtggcattcaagcatgccgatgagctggcggccatcatttacaccagcggcacc
accggccgctccaaaggtgccatgttgacgcacggcaatttgctcagcaacgcccaggtg
ctgaaaagttactggggctggcgcagcttggatgagggtggtgatgtgctgctgcatgcc
ttgccgatctttcatgtgcatggcctgtttgtggcgattcacggcgcactgctgagcggc
agccagatgatctggctcaatcagtttgatcccaaaacggtgatcaagaagctgcctgaa
gccactgtgttcatgggtgtgcccacgctttatgtgcgcctgctggccgaaccgggcctg
acccgggaagtggcgcgtcacatgcggctcttcatttctggctccgcccccttgttgatt
gaaactttcaaggcctggcaggagcgcaccggccacactattctggagcgctatggcatg
agcgaaaccgccatgatcacgtccaacccgtaccgcgagtcggaaggcgcgcgccgcggt
ggcaccgtcgggctccctttgccgggtgtcagcctgcgggtgcaggacgacgctggcgag
aatgtggcggcaggggaaatcggcaacatcgaggtcatgggacccaacgtgttcaagggt
tactggcacatgccagagaagacagccgaagaattcaccttggatggtttcttcaaaacc
ggcgatgtcggcaaaatcgacgcgcagggctatgtgacgatcgtggggcgcagcaaagac
ctggttatcagcggcggctacaacgtctatccggcggaggtggagggctatatcaacgag
ttgccgggcgtggccgagagcgccgtggttggtgttccccacgctgactttggcgaggtt
ggcgtggccgtggtggtggccaaaccgggtgtggcgctagagtccgccaggattcttgtc
agcctgaaagcgaccttggccaatttcaaggtgcccaagcagtgctttgtggtcgatgcc
ctgccgcgcaacagcatgggcaaggtgcaaaaaaacgtgttgcgcgaacagtattcagcg
tag
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