Rhodoferax ferrireducens: Rfer_2815
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Entry
Rfer_2815 CDS
T00334
Name
(GenBank) Carbamoyl-phosphate synthase L chain, ATP-binding
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00907
Pinene, camphor and geraniol degradation
rfr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Rfer_2815
Enzymes [BR:
rfr01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
Rfer_2815
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
RimK
ATP-grasp_3
HlyD_D23
PTS_EIIA_1
NQRA
LAL_C2
MCC_alpha_BT
Motif
Other DBs
NCBI-ProteinID:
ABD70527
UniProt:
Q21UM6
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All DBs
Position
complement(3115573..3117537)
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AA seq
654 aa
AA seq
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MSFSKILIANRGEIACRVIRTARNLGYRTVAVYSDADQAAPHVRLADEAVHIGGSAAADS
YLRVEVLLQAARKTGADAIHPGYGFLSENAGFAQACLDAGLVFIGPPPSAIEAMGDKALA
KRRMIAAGVPCAPGYLGEEQDDARLTEEALKLGFPLLVKAVAGGGGRGMRLVREAGEIKQ
AIVAARREAQSAFGDGTLMLERLIDNGRHIEIQVFADAHGHAVYLGERDCTAQRRRQKVI
EEAPSPVVNAALRESMGKDAVAAALAVGYRGAGTVEFIVDADLKHYFLEMNTRLQVEHPV
TELVTGFDLVEWQLLVAAGQPLPAIQADIKLTGHAMEARLYVEDPYAGFAPQTGTVRWWR
PQQALLAGVRIDDGIEEGSEISPYYDAMVAKVIVHGRDRNEAIRRLRAALENAPLLGLRN
NGRFLSDLVNHPAFRAAAMTTTLIDQWQEAGEALLQRPLPGDEAWCVVAASLAMQNGANW
RADSVAAFDMPLRCDELTQTLRVHPDRSGQVAVTLGGQKHLVRIIDFKDGKLRFEIDGVT
RTAVAVKHQQELHIALGGASFVFHEVSPFPGKDAALDATRALSPVAGKVTQIQFAVGEGV
KEGQALVCVEAMKMEMWLTAQAAGTVVALHVKVGEQVESGALLIEIELEDEKET
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctcaaagattctgattgccaatcgcggcgagatcgcttgtcgcgtgattcga
accgcgcgtaacttgggttatcgaaccgttgctgtctacagtgatgctgaccaggcggcg
ccgcacgtccgtctggccgatgaagcggtccacatcgggggctctgcggcagccgattcc
tacctgcgggtggaggttttgctgcaagccgcgcgcaagaccggtgccgatgccattcat
cccggttacggattcctgagcgaaaacgcgggctttgcccaggcctgcctggatgctgga
ctcgttttcattgggccgcctccgagtgccattgaggcgatgggtgacaaggcgctggcc
aagcgtcgcatgatcgccgccggtgtgccctgcgcgccaggttatctgggtgaagagcag
gacgacgcgcgactgactgaggaagcgttgaaactcggtttcccgctgctggtcaaggcg
gtggcgggtggtggtggtcgtggtatgcgcctggtgcgtgaggctggcgaaattaaacag
gccattgtggctgcccggcgtgaggcgcaaagtgcctttggcgatggcaccttgatgctg
gaacgcttgatcgacaacggtcggcatattgaaatccaggtgtttgccgacgcgcacggc
catgccgtgtacctgggcgagcgcgactgcacagcccagcgcagaaggcagaaagtgatc
gaggaagcgccgtcgcccgtcgttaatgcggcgctgcgcgagtccatgggcaaggatgct
gttgcggcagcactggccgtgggttaccgcggggcgggcacggtggagttcatcgttgat
gccgacctcaagcactatttcctggaaatgaacacccgtttgcaggtcgagcacccggtg
accgagctggtgacggggtttgatctggtggagtggcaactgctggtggcagccggtcag
cccctgccggcaattcaggccgacatcaaactgacgggccatgcgatggaagcgcgcctg
tatgtggaagacccgtatgccggctttgcgccacaaaccggaacggtgcgctggtggcgt
ccccagcaagccctgttggccggggtgcgcattgacgacggcatcgaagagggcagtgaa
atttctccctattacgacgccatggtggccaaggtcatcgtgcatgggcgtgaccgcaat
gaggcgatccgccgcttgcgcgccgccctggagaacgcgcccctgctcgggctgcgcaac
aacggtcgttttctgtctgatctggtgaaccatccggcattccgtgccgcggcgatgacc
accaccctgatcgaccagtggcaggaggcgggtgaggcgctgctgcagcgtccgctgccg
ggcgacgaagcctggtgcgttgtggcagcaagcttggccatgcaaaacggcgccaactgg
cgtgccgacagtgtggcggcctttgatatgcctttgcgctgcgatgagctcacgcaaacg
cttcgggttcacccggaccggtcggggcaggtggcggtcactttgggaggccaaaagcat
ctggtgcggatcatcgacttcaaggatggcaagctgcgcttcgagatcgatggcgtgacg
cgaaccgcggtggcggtcaagcatcagcaggaattgcacatcgcgttgggaggcgcctct
tttgtcttccatgaagtttcgccatttccaggcaaagacgcggcgctggacgccacccgg
gcgctatcccctgtggccggcaaggtcacgcaaattcaatttgcggtcggtgagggcgtc
aaagaggggcaggccctggtctgcgttgaagccatgaagatggaaatgtggctgacggca
caggccgccggcacggtggtggccttgcacgtgaaagttggcgagcaggtcgaatcgggt
gccttgctgatcgaaattgaactggaagacgaaaaggaaacatga
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