Rhodoferax ferrireducens: Rfer_3487
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Entry
Rfer_3487 CDS
T00334
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00362
Benzoate degradation
rfr01100
Metabolic pathways
rfr01120
Microbial metabolism in diverse environments
rfr01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rfer_3487
Enzymes [BR:
rfr01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
Rfer_3487
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GFIT
Motif
Pfam:
Lyase_1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
ABD71193
UniProt:
Q21SR0
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All DBs
Position
3878546..3879898
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AA seq
450 aa
AA seq
DB search
MASTIIDSRIFGDMFSDARMRQVWSDENRTAKYLDIERALAKVQGELGIIPKEAADEIVQ
HCELSMIDWDKLKAKTEQIGYPIIAVVNQINTNCRDGLGEYCHWGATTQDITDTATVLQM
REGLALVEQDLADISDALATLAKKYRDTPIIGRSNLQQSTPITFGYKMASILAGIERHRE
RLSQLKPRVLMGEFGGASGTLSSLEKGAMETQAGLMKELGLAQPLISWHTVRDTIAEVGA
FLGLVGGSLGKIAMDVKLMMQTEVGEVFEPYAPGRGSSSTMPQKRNPISCLYIHANVSVA
RQHAAALMDAMVADHERSTGPWEIEWVSLPEIFCLMSGALKQTKFVLQGLEVDAVRMRAN
MDITNGLVMSEAVMMGLGPYIGREYAHDLVYDLCRQALKEHRPLIDILEAHPEINKHVTR
VQLEAMCDPINHLGQAGVMVDRVLAARQGV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaccatcattgactcccggatttttggcgacatgttcagcgatgcccgcatg
cgccaggtctggtcggacgaaaaccgaaccgccaaataccttgacatcgagcgcgccttg
gccaaggtgcagggcgagctgggcatcatccccaaagaggccgcggacgagatcgtccaa
cactgcgagctgtccatgatcgactgggacaagctcaaagccaagacagagcagattggc
taccccatcattgccgtggtgaaccagatcaacaccaattgccgcgacggcctgggcgaa
tactgccactggggtgccaccacgcaagacatcaccgacacggccaccgtgctgcaaatg
cgcgaaggcctggccctggtcgagcaggacctggccgacatttcggacgcgctggccaca
ctggccaagaagtaccgcgacacgcccatcattggccgcagcaacctgcaacagtccaca
cccatcacctttggctacaagatggccagtatcctggccggcatcgagcgccaccgcgag
cgcctgagccagctcaaaccccgtgtgctgatgggtgagtttggcggtgcctccggcaca
ctctcttcgctggaaaaaggtgccatggaaacccaggccggcctgatgaaagagctgggt
ctggcgcagccgctgatctcctggcacacggtgcgcgacaccattgccgaagtcggtgcc
ttcctcggcctggtgggcggctcactcggcaagatcgcgatggacgtgaagctgatgatg
cagaccgaagtgggcgaggtgtttgagccctatgcccctggccgtggttcgtcttccacc
atgccgcaaaagcgcaacccgatctcctgcctgtatatccacgccaacgtgtcggtggca
cgccagcacgctgcggccttgatggatgccatggtggccgaccatgagcgctccaccggc
ccctgggaaattgaatgggtgtcgctgccggaaatcttctgcctgatgtcgggcgcgttg
aaacaaaccaagtttgtgctgcaaggcctggaggtggatgcggtgcgcatgcgcgccaac
atggacatcaccaacgggctggtcatgtccgaggcggtgatgatgggactgggcccgtac
attggccgcgaatacgctcacgacctggtgtacgacctgtgccgccaggcattaaaagag
catcgcccgctgatcgacattctggaagcccaccccgagatcaacaaacacgtgacccgt
gtccagctcgaagccatgtgcgaccctatcaaccacctcggccaggccggtgtgatggtg
gaccgtgtgctggcggcgcgccagggagtttga
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