Pseudorhizobium flavum: RFYW14_00090
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Entry
RFYW14_00090 CDS
T07144
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv03030
DNA replication
rfv03410
Base excision repair
rfv03420
Nucleotide excision repair
rfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RFYW14_00090
03410 Base excision repair
RFYW14_00090
03420 Nucleotide excision repair
RFYW14_00090
03440 Homologous recombination
RFYW14_00090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfv03032
]
RFYW14_00090
03400 DNA repair and recombination proteins [BR:
rfv03400
]
RFYW14_00090
Enzymes [BR:
rfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RFYW14_00090
DNA replication proteins [BR:
rfv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RFYW14_00090
DNA repair and recombination proteins [BR:
rfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RFYW14_00090
NER (nucleotide excision repair)
GGR (global genome repair) factors
RFYW14_00090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
CAD6595612
LinkDB
All DBs
Position
1:90061..93066
Genome browser
AA seq
1001 aa
AA seq
DB search
MDDAGAPRYSIAMKKGDHLFLVDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKL
LTDARDTSVGVTPTHFAVIFDYSAKTFRKDLYNAYKANRSEPPEDLIPQFGLIRQATRAF
NLPCIETEGFEADDIIATYARQAEAIGADVTIISSDKDLMQLVTPNVHMYDSMKDKQIGI
PEVIEKWGVPPEKMIDLQAMVGDSVDNVPGIPGIGPKTAAQLLEEFGDLDTLLARAAEIK
QVKRRENIVANAELARLSRRLVELRTDAPLDMPLDALVLEPQNGPKLIGFLKAMEFGTLT
RRVAEACDCDASAIEPAHVQVEWGAAARGPDLDAGTSSAEPRVATPAGGKAGTTDPYGNS
TPAELAKARAEAFATAKIDKSCYVTIDDLEDLDDWLRSARETGLVAFEAEGTSIDPMLSD
VVGISLALADNSRNASGLDVRAAYIPFGHKTGSNDLLGNGRADNQLTAAEVMERLKPLLE
DASVLKVGHNLKYAYLLLKRYGIEIAAYDDVMLMSYVLEAGRGGHSLDSLSDRWLGHMPV
SFKDVAGTGKSGVSFDMVEIDRATVYAAEKADLTLRLAMVLKPRLVADRLMRVYERLERP
MVSTLARMEERGITVDRQILSRLSGELAQKAAAIEDEIYEIAGERFTIGSPKQLGDILFG
KMGLPGGAKTKTGQWSTSAQVLEDLAAAGHEFPRKIVDWRQLTKLKSTYTDALPGYIHPQ
TKRVHTSYSLASTTTGRLSSVEPNLQNIPIRTTEGRKIRTAFIATSGHKLVSADYSQIEL
RVLAHVADIPQLRQAFADGIDIHAMTASEMFGVPVEGMPSEIRRRAKAINFGIIYGISAF
GLANQLSIERSEAGEYIKKYFERFPGIRDYMDSTKEFAREHGYVETIFGRRAHYPEIRSS
NPQVRSFNERAAINAPIQGSAADIIRRAMVRMEQALQSANLSARMLLQVHDELIFEVEDA
EIEKTLPVITATMEQAAMPAIAMKVPLKVDARAASNWDEAH
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgcgggtgccccacgctattccatagccatgaaaaaaggtgatcacctcttc
cttgtcgacggctccggcttcatcttccgggcgttccacgcccttcccccactgacccgc
aagtccgacggcctgcccgtgggagcggtctcgggcttctgcaacatgctctggaagctg
ctcaccgatgcgcgcgacacctcggtcggggtgacgcccacgcattttgccgtgatcttc
gactattccgcgaagaccttccgcaaggacctctacaacgcctacaaggcgaaccgttcc
gagccgccggaagacctgatcccgcagttcgggctgatccgccaggcaacgagggcattc
aaccttccctgtatcgagaccgaaggcttcgaggcggacgacatcattgccacctatgct
aggcaggcggaagcgatcggcgctgacgtcacgatcatctcgtccgacaaggacctgatg
cagctcgtgaccccgaatgtccacatgtatgacagcatgaaggacaagcagataggcata
ccagaagtcatcgagaaatggggtgtgccgcctgagaagatgatcgacctgcaggcaatg
gtcggggattccgtcgacaatgtccccggcatccccgggatcggcccgaagaccgcagcc
cagctcctggaggagttcggcgacctcgatacgcttctcgcccgtgctgcggagatcaag
caggtcaagcggcgtgagaacatcgttgccaatgcggaactggcacgcctgtcgcgccgg
ctcgttgaactgcggacggatgcaccccttgatatgccgctggatgctctcgtgctggag
ccgcagaacggaccgaagctgatcggtttcctgaaggccatggaattcgggacgttgacg
cgccgtgtggcggaggcctgcgactgcgatgccagcgcgatcgagccggcgcacgtgcag
gtcgaatggggagcggcggcgcgggggccggatctcgatgccggcaccagcagtgccgag
cccagggtagcgacgcctgccggtggcaaggccggcacaactgacccctacggcaacagt
accccggcggaacttgccaaggcacgagctgaggccttcgcgacggcgaagatcgacaag
agctgctacgtcacgatcgacgatctggaggacctggacgattggctccggtcagcccgg
gaaaccggactggtggcttttgaagccgagggaacgtccatcgacccgatgctgtcggat
gtcgtggggatctcgctggcgctcgccgacaatagccgtaatgcgtccggtctcgacgtc
cgggccgcctatatccccttcggccacaagactggaagcaatgatctgctcggcaatggc
cgtgccgacaatcagctgactgccgccgaggtgatggagcggctgaagcccctgctcgaa
gatgcttccgtcctcaaggtcgggcataacctgaaatatgcctatctgctcctcaagcgg
tacgggatcgaaatcgccgcctatgacgacgtgatgctcatgtcctacgtcctggaggca
ggcaggggcggacacagcctcgattcgctctccgaccgctggcttggccatatgccggtc
tcattcaaggatgtcgcggggacgggcaagtctggcgtgagctttgatatggtcgagatc
gaccgggctacggtctacgccgccgaaaaggcggatctcaccctcaggcttgccatggtt
ctgaaaccgcggctggtcgccgaccgattgatgcgcgtctatgagcggctggagcggccg
atggtctccacgctcgcccgcatggaggagcgcggcatcacggtcgaccgccagatactc
tctcggctgtccggggagctcgcgcaaaaggccgcggcgatagaggacgagatctacgag
atcgccggcgagcgcttcacgatcggctcaccgaagcagctgggcgacatcctgttcggc
aagatgggcctgccgggcggggcaaagacgaagacgggccagtggtccacctcggcgcag
gtgctggaagacctggctgcggccgggcacgagtttccgcgcaagatcgtcgactggcgg
caactgaccaagctcaagtctacctatacagacgctctgccgggctacatccacccgcag
acaaagcgcgttcacacgtcctattcactggcatcgacgacgaccgggcgtctttcgtcg
gtcgagccgaacctgcagaacatcccaatccgcacgaccgaaggacggaagatccgcacc
gccttcatcgccacatccggccacaagcttgtctctgccgactacagccagatcgaactg
cgggtactcgcccatgtcgctgacatcccgcaactgcgccaggcgtttgcagacggcatc
gacatccacgcgatgaccgcctcggaaatgttcggggtaccggttgagggcatgccaagc
gagatccgccgccgcgccaaggcgatcaacttcggcatcatctacggcatctccgccttc
ggtctggcgaaccagctctccatcgagcgctccgaagcaggcgagtacatcaagaagtat
ttcgagcgattccccggcatccgcgactacatggacagcaccaaggaattcgcccgcgag
cacggctacgtcgaaaccatcttcggccgccgggcgcactatccggagatacggtcctcc
aatccgcaggtgcgctccttcaacgaacgggctgccatcaacgcgccgatccaggggtcg
gccgccgacatcatccgtcgcgccatggttaggatggaacaggctctccaatctgcaaac
ctgtctgcccgcatgcttctgcaggtccatgacgaactgatcttcgaagtggaagacgca
gagatcgagaagacgctgcccgtcatcacggcgaccatggagcaggcggctatgccggcg
atcgccatgaaggtgccgctgaaggtcgatgcgcgcgcagcgtcaaactgggacgaggcg
cactag
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integrated database retrieval system
