Rubrivivax gelatinosus: RGE_06060
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Entry
RGE_06060 CDS
T01803
Symbol
cobN
Name
(GenBank) cobalamin biosynthetic protein CobN
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00860
Porphyrin metabolism
rge01100
Metabolic pathways
rge01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RGE_06060 (cobN)
Enzymes [BR:
rge01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
RGE_06060 (cobN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
BAL93951
UniProt:
I0HLR4
LinkDB
All DBs
Position
633779..637783
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AA seq
1334 aa
AA seq
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MRPAASLPGEARHCQLAAARRRLVAAAVALAALLMLLALPAQAARVLVVTTSPVPPAKLA
ALARVGGPLGLDVQARYVEKLGTIDATLWDGADLVLLDAPRAHIEAWMREKLAPALPALE
RRRHVWLSTAEARPHEVPADLAQRLHAYYVNGAGPNLRHFVQTLDDWLDGRPWGGHPDPV
VFPATGIYHPKYPGLVTAATRDYLAWKGVAADGKRAPVVGIVFHPQSVAAEETELLDALI
ARLEAQGAVPLAFYTPVLDADAVRRVALVDGRPVVDVLINTQITLSPDARRAEFEALGVP
VIQAMAYRRGDTAAWRADPQGVRIDDVPFYLSQAETAGITDILIASATGGADERVEPIAP
QVHAVVAKAMKLVALQRKPAADKHVALFFWNYPPGEKNLSASFMNLPRSLVATLAALRQA
GYTTETQDEAVLTASLQRLLEPAYRPAADREVLERLLRDGLADWLPVARYRAWLAGLPPE
VGARLDERWGAPERSTWIVRRGGQDGFVVPRLRLGGISLLPQPPRGERGEDREKAIYHST
SAVPSHHYFAVYLWAREQFAADALVHFGTHGTQEWLPGKERGLSVFDDALLAVGDVPVVY
PYIVDNIGEALQTKRRGRAVVVSHQTPALAPAGLHDALTALHDALHQWLAQGEGQVRDAL
RRQITDGVKRERIAADMGWSEARVEADFPAFISALHDHLHELALTVQPVGLHSFGRAPEE
RWRLATVMEMLGRETIVALAAPGEEADEVLVGDWKKLTETATYRRLHEYIVEGADTAALP
TPAREAVERGRRWYADLGAEGELAGLLDALAGRYRPTSYGGDPIKNPDSLPTGRNLYGFD
PSRVPTKAAWEAGKQALEQLAAAHRAKTGRAPAKLAFTLWSVETMRHQGLLEAQALWALG
VEPVWDAGGRVADVKLVPRAALGRPRIDVVLSATGLYRDHFPNVMRQLAKAARLASQADE
ADNPVAANARRIAAGLRERGLDAAAAERAGQTRIFSSESGRYGSGLDDAALATDTWKTQA
EGDRKLATLYLSRMQYAYGPDEAEWGQAGTTANLYAEHLKGTEGAVLARSSNLYGMLTTD
DPFQYLGGLSLAVRHLDGKAPELYISNLRGPGAGRVEGAAEFLAKELATRNFHPGHISGL
MAEGYAGTLQVLDGINNFAGWQSVAREIVRDDQWQEFMDVYVRDKHQLGIRRWFESRNPH
AMAQVIERLLEAARLGQWKAAPESVAELKARWRELAQRHDVRPDSAAFAAFVGYGLAPQP
AAPAPAPAAPADAAPVPPEPAAARPPVEGLLLERVAPPPAEASRAALALAAIALALAGGA
LRGRRSRSSLSFAT
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgccgccagcctgccgggcgaggcccggcactgccagctcgccgccgcccgc
cgccgcctcgtggcggcggccgtcgcgctcgccgcgctgctgatgctgctcgcgctgccg
gcgcaagccgcacgcgtgctcgtcgtcaccacctcgccggtgccgccggccaagctcgcg
gcgctggcacgtgtgggcggcccgctggggctggacgttcaggcccgctacgtcgagaag
ctcggcaccatcgacgccacgctctgggacggcgccgatctcgtgctgctggacgcgccg
cgcgcccacatcgaagcctggatgcgcgagaagctggcgcccgcgctgccggcgctggag
cgccgccggcatgtctggctgtccaccgccgaggcgcgcccgcacgaggtgccggccgac
ctcgcccaacgcctgcacgcctattacgtcaacggcgccgggcccaacctgcgccacttc
gtccagacgctggacgactggctggacggccggccctggggcggccaccccgacccggtg
gtcttcccggccaccgggatctaccacccgaaataccccggcctggtcaccgcggcgacg
cgcgactacctggcttggaagggcgtggccgccgacggcaaacgagcgccggtcgtcggc
atcgtcttccacccgcagagcgtcgccgccgaagagaccgagctgctggacgcgctgatc
gcccgcctggaagcgcagggcgcggtgccgctggccttctacacgccggtgctcgacgcc
gacgcggtgcgccgcgtcgcgctcgtcgacggccggccggtggtcgacgtgctgatcaac
acccagatcacgctgagccccgacgcccgccgcgccgagttcgaggccctgggcgtgccg
gtcatccaggccatggcctatcgccgcggcgacaccgccgcctggcgtgccgacccgcag
ggcgtgcgcatcgacgacgtgccgttctacctgtcgcaggccgagaccgccggcatcacc
gacatcctgatcgcctcggccaccggcggcgccgacgaacgtgtggagccgatcgcgccg
caggtccacgccgtcgtcgccaaggcgatgaaactcgtcgcgctgcagcgtaagccagcg
gccgacaaacacgtcgcgctgttcttctggaactacccgccgggcgagaagaacctgtcg
gcctcgttcatgaacttgccgcgcagcctggtggcgacgcttgcggcgctgcgccaggcc
ggctacacgaccgagacccaggacgaggcggtgctgacggcctcgctgcagcgattgctg
gagcccgcctaccgcccggccgccgaccgcgaggtgctggagcggctgctgcgcgacggc
ctggccgactggctgccggtcgcgcgctaccgcgcttggctggcgggcctgccgccggag
gtcggcgcgcggctggacgaacgctggggcgcgcccgaacgttcgacctggatcgtgcgc
cgcggcggccaggacgggttcgtcgtgccgcggctgcgcctgggcggcatcagcctgctg
ccgcagccgccacgcggcgaacgcggcgaagaccgcgagaaggccatctaccactcgacc
agcgccgtgccttcgcaccactacttcgccgtctacctctgggcgcgcgagcagttcgcc
gccgacgcgctggtgcacttcggcacccacggcacgcaggaatggctgccgggcaaggag
cgcgggctctcggtcttcgacgacgcgctgctggccgtcggcgacgtgccggtggtctac
ccgtacatcgtcgacaacatcggcgaggcgctgcagaccaaacgccgcggccgtgcggtc
gtcgtctcgcaccagacgccggcgctggcgccggccgggctgcacgacgcgctgaccgcg
ctgcacgacgcgctgcaccagtggctggcgcaaggcgagggccaggtgcgcgacgcgctg
cggcggcagatcaccgacggcgtcaagcgcgagcgcatcgccgccgacatgggctggagc
gaggcgcgtgtcgaggccgacttcccggccttcatcagcgcgctgcacgaccatctgcac
gagctcgcgctgaccgtgcagccggtcggcctgcacagcttcggccgcgcgcccgaggaa
cgctggcgcctggcgacggtgatggagatgctgggccgcgagaccatcgtcgcgctggcc
gcaccgggcgaagaggccgacgaggtgctggtcggcgactggaagaagctcaccgagacc
gccacctaccgccgcctgcacgagtacatcgtcgaaggcgccgacaccgcggcgctgccg
acgccggcgcgcgaagcggtcgaacgtggccggcgctggtacgccgacctgggcgccgaa
ggcgagctcgccgggctgctggacgcgctggccgggcgttaccggccgacgagctacggc
ggcgacccgatcaagaaccccgactcgctgccgaccgggcgcaatctctacggcttcgac
ccctcgcgggtgccgaccaaggccgcctgggaagccggcaagcaggcgctggagcagctc
gccgccgcgcaccgcgccaagaccggccgagcgccggccaagctggcgttcacgctgtgg
tcggtggagacgatgcgccaccagggcctgctcgaagcgcaggcgctgtgggcgctgggc
gtcgagccggtctgggacgccggcgggcgcgtcgccgacgtcaagctggtgccgcgcgct
gcgctgggccggccgcgcatcgacgttgtgctctcggccaccgggctgtaccgcgaccac
ttccccaacgtgatgcgccagctcgccaaggcggcgcggctggcgtcgcaggccgacgaa
gccgacaacccggtggcggccaacgcgcgccgcatcgccgccgggctgcgtgaacgcggc
ctggacgcggccgccgccgaacgcgccgggcagacgcgcatcttctcgtccgagtcgggc
cgttacggcagcggcctggacgacgcggcgctggccaccgacacctggaagacccaggcc
gaaggcgaccgcaagctggcgacgctgtacctgtcgcgcatgcagtacgcctacggcccc
gacgaggccgagtggggccaggccggcaccacggccaacctctacgccgagcacctgaaa
ggcaccgaaggcgcggtgctggcgcgcagctccaacctctacggcatgctgaccaccgac
gacccgttccagtacctgggcgggctgtcgctggccgtgcgccacctcgacggcaaggcg
cccgagctctacatcagcaacctgcgcgggccgggcgcggggcgggtcgaaggtgccgcc
gagttcctggccaaggagctggcgacccgcaacttccaccccggccacatcagcggcttg
atggccgagggctacgccggcacgctgcaggtgctcgacggcatcaacaacttcgccggc
tggcagagcgtggcacgcgagatcgtgcgcgacgaccagtggcaggagttcatggacgtc
tacgtgcgcgacaagcatcagctcggcatccgccgctggttcgagagccgcaacccgcac
gcgatggcgcaagtcatcgaacgtttgctcgaagccgcgcgcctgggccagtggaaggcg
gcgccggaaagcgtcgccgagctgaaggcgcgctggcgcgagctggcgcagcgccacgac
gtgcggcccgacagcgccgcgttcgccgccttcgtcggctacggcctcgcgccgcagccg
gccgcgccggcgcccgcacccgcggcgcccgccgacgcggcccccgttccccccgagccc
gccgcggcacggcccccggtcgagggcctgctgctcgaacgtgtcgccccgccgccggcc
gaggcctcgcgcgccgcgctggcgctggccgccatcgcgctggcgctggccggcggcgcg
ctgcgcggccggcgctcccgttcctctctttcgttcgccacctga
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