Rubrivivax gelatinosus: RGE_30960
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Entry
RGE_30960 CDS
T01803
Name
(GenBank) tetracycline-efflux transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
rge
Rubrivivax gelatinosus
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rge02000
]
RGE_30960
01504 Antimicrobial resistance genes [BR:
rge01504
]
RGE_30960
Transporters [BR:
rge02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
RGE_30960
Antimicrobial resistance genes [BR:
rge01504
]
Gene variants
Tetracycline resistance genes
Transporters
RGE_30960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_1_like
LacY_symp
Motif
Other DBs
NCBI-ProteinID:
BAL96435
UniProt:
I0HTU8
LinkDB
All DBs
Position
complement(3290639..3291898)
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AA seq
419 aa
AA seq
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METSPAPVHPGGRPAAMRFIMLVVLIDMLAVGVISPVLPALVGVFTTSPAEQTYWYGVVA
FSYAVACFFGAPVLGALSDRYGRRPVLLLGFCGLAFNFFMTALSTSVWMLVASRIVGGAM
QANAAVANAYVADITPPQERAKRFGMLGAMFGIGFILGPVIGGILGGIDPHLPFFVAGTL
ALLNLAYGYFVLPESLPLERRRAFDWKRANPFSALKELAQLKGVGALVAVLGCAALAQFS
LYTTWVLYTTFKFGWGPSQNGWSLFAIGLVSAIVQGGLLGRLLKHYGAKRLAVMGLLSST
LSFVAFGLVTEGWMMYVVIAANILGNTITASLQGLVSGAAHHDNQGQTMGSVSSLNSLMA
VVAPTLAAPLLGLVSHLPHGDWRIGTPMFFSAALQALALAFAIAHFRKQRRARLAAKAA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttggagacgtcccccgcgccggtgcatcccggcggccggccggcagcgatgcgtttcatc
atgctggtcgtgctcatcgacatgctggcggtgggcgtcatctcgccggtgctgccggcg
ctggtcggtgtcttcaccaccagcccggccgagcagacctactggtacggcgtcgtcgcg
ttctcgtacgcggtggcgtgtttcttcggcgcgccggtcctgggcgcgctgtccgaccgc
tacggccgtcgcccggtgctgctgctgggcttctgcggcctggcgttcaacttcttcatg
accgcgctgtccacctcggtgtggatgctcgtggcctcgcgcatcgtcggcggcgcgatg
caggccaacgccgcggtcgccaacgcctacgtcgccgacatcacgccgccgcaggagcgc
gccaagcgcttcggcatgctgggcgcgatgttcggcatcggcttcatcctcgggccggtg
atcggcggcatcctcggcggcatcgacccgcacctgccgttcttcgtcgccggcacgctg
gcgctgctgaacctggcctacggctacttcgtgctgcccgagtcgctgccgctggagcgc
cgccgcgccttcgactggaaacgcgccaacccgttctcggcgctgaaggagctggcccag
ctgaagggtgtcggcgcgctcgtcgccgtgctcggctgcgctgcgctcgcccagttctcg
ctgtacacgacctgggtgctctacacgaccttcaagttcggctggggcccgtcgcagaac
ggctggtcgctgttcgcgatcggcctggtgtcggcgatcgtgcagggcgggctgctgggc
cggctgctgaagcactacggtgccaagcggctggcggtgatggggctgctgtcgtcgacg
ctgtccttcgtcgccttcggtctcgtcaccgagggctggatgatgtacgtcgtgatcgcc
gccaacatcctgggcaacacgatcaccgcgtcgcttcagggcctggtctcgggtgccgcg
caccacgacaaccaaggtcagacgatgggctcggtgagttcgctcaacagcctgatggcc
gtcgtcgcgccgacgctggccgcgccgctgctggggctggtgtcgcacctgccgcacggc
gactggcgcatcggcacgccgatgttcttctcggcggcgctgcaggccctggcgctggcc
ttcgcgatcgcccatttccgcaaacaacgccgagcgcggctggccgccaaagccgcgtga
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