Rubrivivax gelatinosus: RGE_32900
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Entry
RGE_32900 CDS
T01803
Name
(GenBank) carbamoyl-phosphate synthase L chain, ATP-binding
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00907
Pinene, camphor and geraniol degradation
rge01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RGE_32900
Enzymes [BR:
rge01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
RGE_32900
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
MCC_alpha_BT
Biotin_lipoyl_2
RnfC_N
HlyD_3
DUF2118
HlyD_D23
NQRA
Motif
Other DBs
NCBI-ProteinID:
BAL96629
UniProt:
I0HUE2
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All DBs
Position
3510546..3512447
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AA seq
633 aa
AA seq
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MSRRFETVLVANRGEIACRVMRTARRLGYRTVAVYSDADAAAPHVRQADLAVRLGPGPAS
ESYLNVAAVLDAAARAGADAVHPGYGFLSERADFAAAVEAAGLVFIGPPAEAIRAMGDKA
GAKRRMLAAGVPCAPGYLGDEQDEGRLAAEAEALGVPLLVKAVAGGGGRGMRLVRRADEL
ATALAGARREAESAFGDGRLMLERLIAGARHVEVQVFADAHGHAVHLGERDCTAQRRRQK
VVEEAPSPIVGPEMRATMGRDAVAAALAVGYRGAGTVEFVVDAGGRHFFLEMNTRLQVEH
PVTEAITGLDLVEWQLRIAAGEPLPLTQDQIRFDGHAVEARLYTEDPYAGWTPQTGRVLH
WRPEDAGLRVDHGLAEGGEVPPYYDAMVAKFVAHGRDRTDALRRLRRALADAPLLGLRSN
AGFLRALLAHPDFVAARLTTTRLDEWAEHGEPLLQRPCPPEAAWALAAALLATGAGWRPA
GLATSELTLAHDGERRTLRAPPPGLQVLEWAADGRVRWQADGLQRHALARRDGATLHLAL
DGEVFVFSEPMAGARDVAEDASRACAPVAGVVAQVLVAPGDRVETGQRLACVEAMKMEMW
LQAGAAGVVRAVHAAAKDPVAAGALLVELELDS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgagccggcgcttcgaaaccgtgctcgtcgccaaccgcggcgagatcgcctgccgcgtg
atgcgcacggcgcgccgcctgggttaccgcacggtggccgtctacagcgacgccgacgcg
gcggcgccgcacgtgcgccaggccgacctcgccgtgcgcctggggccggggccggcgtcg
gagtcctatctgaacgtcgccgcggtgctggacgccgcggcgcgtgccggcgccgacgcc
gtgcaccccggctacgggttcctgtccgaacgcgccgatttcgccgccgcggtcgaggcc
gccggcttggtgttcatcggcccgccggccgaagccatccgcgcgatgggcgacaaggcc
ggcgccaagcgccgcatgctcgccgccggcgtgccctgcgcgccgggttacctgggcgac
gagcaggacgaggggcgtctggccgccgaagccgaagccctgggcgtgccgctgctggtg
aaagccgtggccggcggcggcgggcgcggcatgcgcctggtgcgccgcgccgacgagctg
gccacggcgctggcaggcgcacgccgcgaagccgagagcgctttcggcgacggccggctg
atgctggaacggctcatagccggcgcacgccacgtcgaggtccaggtcttcgccgacgcg
cacggccacgccgtccacctgggtgaacgcgactgcacggcgcagcggcggcggcagaag
gtcgtcgaagaggcgccgtcgccgatcgtcggccccgagatgcgcgccacgatgggccgc
gacgcggtggccgcggcgctggccgtcggctaccgcggcgccggcaccgtcgagttcgtc
gtcgacgccgggggccggcatttcttcctcgagatgaacacgcggctgcaggtcgaacat
ccggtcaccgaggcgatcaccgggctggacctggtcgaatggcagctgcgcatcgccgcc
ggcgagccgctgccgctgacgcaggatcagatccgcttcgacggccacgcggtcgaagcc
cggctctacaccgaagacccgtatgccggctggacgccgcagaccggccgtgtgctgcac
tggcggcccgaagacgccgggctgcgcgtcgaccacggcctggccgaaggcggcgaagtg
ccgccgtattacgacgcgatggtcgccaagttcgtcgcccacggccgcgaccgcaccgac
gccttgcgccggctgcgccgcgcgctggccgatgcgccgctgttaggcttgcgcagcaac
gccggtttcctgcgtgcgctgctggcgcacccggacttcgtcgccgcgcgtttgacgacg
acacgcctggacgaatgggccgaacacggcgagccgctgctgcagcgcccttgcccgccc
gaggccgcgtgggcgctggccgcagcgctgctcgccaccggcgccggctggcggcccgcc
ggcctggccaccagcgaactgacgctggcccacgacggcgagcgccgcacgctgcgcgcg
ccgccgcctggccttcaggtgctcgaatgggccgccgacggccgcgtgcgctggcaagcc
gacggcctgcagcgccacgcgctggcacgccgcgacggcgccacgctgcacctggcgctg
gacggcgaggtcttcgtcttcagcgagcccatggccggcgcacgcgacgtggccgaagac
gcctcgcgcgcctgcgcgccggtggccggcgtcgtcgcccaggtgctggtggcgccgggc
gatcgggtcgaaaccggccagcgcctggcctgcgtcgaggcgatgaagatggagatgtgg
ctgcaagccggcgccgccggcgtcgtgcgcgcggtgcacgccgctgccaaggacccggtg
gccgccggggcgctgctggtcgaactggagctggattcatga
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