Rubrivivax gelatinosus: RGE_38940
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Entry
RGE_38940 CDS
T01803
Symbol
ubiD
Name
(GenBank) 3-polyprenyl-4-hydroxybenzoate decarboxylase UbiD
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00130
Ubiquinone and other terpenoid-quinone biosynthesis
rge01100
Metabolic pathways
rge01110
Biosynthesis of secondary metabolites
rge01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
RGE_38940 (ubiD)
Enzymes [BR:
rge01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
RGE_38940 (ubiD)
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GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
BAL97230
UniProt:
I0HW43
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All DBs
Position
complement(4179855..4181408)
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AA seq
517 aa
AA seq
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MIYRDLRDFITQLEARGELRTITDPVSPVLEMTALGDQLLRAGGPAVLCRNPTGFSIPVL
LNLFGTPQRVALGMGASSTAELRDVGRLLAGLKEPEPPKGLKDAGKLLSMAKALWDMKPS
VQRSAPCQEVVLQGPDVDLGRLPIQTCWPGDAGPLLTWGLVVTRGPQAVATPRLRQNLGI
YRQQLIGRNQLIMRWLAHRGGALDFREFALANPGKPFPIAVALGADPATILGAVTPVPDS
LSEYQFAGLLRGSRTELVDSGVGEGRALQVPASAEIVLEGHIPPAPAGFTGESDRGVKLC
ERGGYLHALEGPFGDHTGYYNEQDWFPVFQVDRITHRRDPIYHSTYTGKPPDEPAVLGVA
LNEVFVPILQKQFPEIADFYLPPEGCSYRMAVISIRKAYPGHAKRVMFGLWSFLRQFMYT
KFIVVTDEDVNIREWREVIWAITTRMDPVRDTTLVSETPIDYLDFASPVSGLGGKMGLDA
TNKWPGETSREWGRPITMDAAVEQRVRSLAERLISPP
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccgagacttgcgggacttcatcacccagctcgaagcccgcggagagctgcgc
accatcaccgatccggtgtctccggtgctcgagatgaccgcgctgggcgaccagttgctg
cgtgccggcggcccggcggtgctgtgccgcaacccgaccggtttttcgatcccggtgctg
ctgaatcttttcggcaccccccaacgtgtagccctcggaatgggggcctcgtcgaccgcc
gagctgcgcgacgtcggccggctgctggccgggctcaaggagcccgagccgcccaagggc
ctgaaggacgccggcaagctgctgtcgatggccaaggcgctgtgggacatgaagccttcg
gtgcagcgcagcgcgccctgccaggaggtggtgctccagggcccggacgtcgacctcggc
cgcctgccgatccaaacctgctggcccggcgacgctggcccgctgctgacctggggcctg
gtcgtcacgcgcggcccgcaggccgtggccacgccgcggctgcgccagaacctgggcatc
taccgccagcagctgatcggccgcaaccagctgatcatgcgctggctggcgcaccgcggc
ggcgcgctggatttccgcgagttcgcgctcgccaaccccggcaagcccttcccgatcgcg
gtggctctgggcgccgacccggcgaccatcctcggcgccgtgacgccggtgcccgacagc
ctgtccgaataccagttcgccggcctgctgcgcggcagccgcaccgaactcgtcgactcc
ggcgtcggcgaaggccgggcgctgcaggtgccggccagcgccgagatcgtgctcgaaggc
cacatcccgccggcgcctgccggcttcaccggcgagtccgaccgcggcgtcaagctctgc
gaacgcggcggctacctgcatgcgctggaaggcccgttcggcgaccacaccggctattac
aacgagcaggactggttcccggtgttccaggtcgaccgcatcacgcaccggcgcgacccg
atctaccactccacctacaccggcaagccgcccgacgagccggcggtgctgggcgtggcg
ttgaacgaggtcttcgtgccgatcctgcagaagcagtttccggaaatcgccgacttctac
ctgccgcccgaaggctgcagctaccgcatggcggtgatctcgatccgcaaggcctacccg
ggccacgccaagcgcgtgatgttcgggctctggagcttcctgcgccagttcatgtacacc
aagttcatcgtcgtcaccgacgaggacgtgaacatccgcgagtggcgcgaagtcatctgg
gcgatcacgacgcgcatggacccggtgcgcgacacgacgctggtctccgagacgccgatc
gactacctggacttcgcctcgccggtcagcggcctgggcggcaagatgggcctggacgcg
accaacaagtggcccggcgagacctcgcgcgagtggggccggccgatcacgatggacgcc
gccgtcgagcagcgtgtgcgctctcttgccgaacgtttgatctcgcccccttga
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