Rubrivivax gelatinosus: RGE_42890
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Entry
RGE_42890 CDS
T01803
Symbol
nifD
Name
(GenBank) nitrogenase molybdenum-iron protein alpha chain NifD
KO
K02586
nitrogenase molybdenum-iron protein alpha chain [EC:
1.18.6.1
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00625
Chloroalkane and chloroalkene degradation
rge00910
Nitrogen metabolism
rge01100
Metabolic pathways
rge01120
Microbial metabolism in diverse environments
Module
rge_M00175
Nitrogen fixation, nitrogen => ammonia
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RGE_42890 (nifD)
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
RGE_42890 (nifD)
Enzymes [BR:
rge01000
]
1. Oxidoreductases
1.18 Acting on iron-sulfur proteins as donors
1.18.6 With dinitrogen as acceptor
1.18.6.1 nitrogenase
RGE_42890 (nifD)
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Motif
Pfam:
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
BAL97625
UniProt:
I0HX88
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All DBs
Position
4588797..4590263
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AA seq
488 aa
AA seq
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MSMTVEERKAANKALIDEVLKAYPDKMAKKRAKHLNAYEEGRPDCGVKSNIKSLPGVMTI
RGCAYAGSKGVVWGPIKDMVHISHGPVGCGQYSWASRRNYYIGITGVDSFGTMQFTSDFQ
EKDIVFGGDKKLEKIIDEIEQLFPLNKGISIQSECPIGLIGDDIEAVSKKKSKEMGGKTI
IPVRCEGFRGVSQSLGHHIANDAIRDWVFDKTDPAKYPEFVSTPYDVAIIGDYNIGGDAW
SSRILLEEIGLRVIAQWSGDGTIAELENTPKAKLNVLHCYRSMNYISRHMEEKYGIPWVE
YNFFGPTQIEKSLREIASHFDDTIKANAERVIAKYRPMVDAVIAKYKPRLDGKKVMLYVG
GLRPRHVIGAYEDLGMEICGTGYEFAHNDDYQRTTHYIKDGTLIYDDVTGYEFEKFVERV
QPDLIGSGIKEKYVFQKMGLPFRQMHSWDYSGPYHGYDGFAIFARDMDIAISSPVWGLAK
GAPWKKAA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaccgttgaagagcgcaaggccgccaacaaggccttgatcgacgaagtgctg
aaggcctatccggacaagatggccaagaagcgcgccaagcacctgaacgcctacgaagag
ggccgtcccgattgcggggtgaagtccaacatcaagtcgcttcccggcgtgatgacgatc
cgcggctgcgcctacgccggctccaagggcgtggtgtggggcccgatcaaggacatggtg
cacatcagccacggcccggtgggctgcggccagtactcctgggcctcgcgccgcaactac
tacatcggcatcaccggggtcgacagcttcggcacgatgcagttcacgtccgacttccag
gagaaggacatcgtcttcggcggcgacaagaagctcgagaagatcatcgacgagatcgag
cagctgttcccgctgaacaagggcatctcgatccagagcgagtgcccgatcggcctgatc
ggcgacgacatcgaggccgtcagcaagaagaagagcaaggagatgggcggcaagaccatc
atcccggtgcgctgcgaaggcttccgcggcgtcagccagtcgctgggccaccacatcgcc
aacgacgcgatccgcgactgggtcttcgacaagaccgacccggccaagtaccccgagttc
gtctccacgccctacgacgtggcgatcatcggcgactacaacatcggcggcgacgcctgg
tccagccgcatcctgctcgaggagatcggcctgcgcgtcatcgcccagtggtccggcgac
ggcacgatcgccgagctggagaacacgcccaaggccaagctcaacgtcctgcactgctac
cggtcgatgaactacatcagccggcacatggaggagaagtacggcatcccctgggtcgaa
tacaacttcttcggcccgacgcagatcgagaagagcctgcgcgagatcgccagccacttc
gacgacacgatcaaggccaacgccgagcgcgtgatcgccaagtaccggccgatggtcgac
gccgtcatcgccaagtacaagccgcgcctggacggcaagaaggtgatgctctacgtcggc
ggcctgcgtccgcgccacgtcatcggcgcctacgaggacctgggcatggagatctgcggc
accggctacgagttcgcccacaacgacgactaccagcgcaccacccactacatcaaggac
ggcacgctgatctacgacgacgtgacgggctacgagttcgagaagttcgtcgagcgcgtg
cagccggacctgatcggctcgggcatcaaggaaaagtacgtcttccagaagatgggcctg
ccgttccggcagatgcacagctgggactactccggcccctaccacggctacgacggcttc
gccatcttcgcccgtgacatggacatcgcgatcagctcgccggtctggggtctcgccaag
ggcgccccctggaagaaagcggcctga
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