Rhodococcus gordoniae: NMQ04_16090
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Entry
NMQ04_16090 CDS
T08682
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
rgor
Rhodococcus gordoniae
Pathway
rgor00860
Porphyrin metabolism
rgor01100
Metabolic pathways
rgor01110
Biosynthesis of secondary metabolites
rgor01120
Microbial metabolism in diverse environments
rgor01240
Biosynthesis of cofactors
Module
rgor_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
rgor_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
rgor00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NMQ04_16090 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rgor04147
]
NMQ04_16090 (hemB)
Enzymes [BR:
rgor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
NMQ04_16090 (hemB)
Exosome [BR:
rgor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
NMQ04_16090 (hemB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
UTT47756
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All DBs
Position
complement(3501638..3502615)
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AA seq
325 aa
AA seq
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MFPDIRPRRLRSTPAIRRLVAETSLEPRHLVLPMFVADGLDEPREIVSMPGVYQHTADSL
RKAAAEAVAAGVGGLMLFGVPRPEDKDARGSAASDPDGVLNRALRSLRSELGDSTVIMAD
TCLDEFTDHGHCGVLTGSGVVDNDATLERYAEMAVAQAEAGAHLLGPSGMMDGQIGFLRS
ALDEAGHTEVGQLAYSAKYASAFYGPFRDAVGSSLEGDRRTYQQDPANRRESMHEVDLDL
AEGADMVMVKPAMSYLDVLREVADRSPVPVAAYQISGEYSMISAAAQKGWIDRDAAILES
LVGIRRAGADIVLTYWAAEVAGRLS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttccccgacatccgtccccgccggctgcgcagcacccctgccatccgacggctggtg
gcagagacctccctcgaaccccgccatctcgtgctcccgatgttcgtggccgacggcctc
gacgaaccgcgcgagatcgtgtcgatgcccggggtgtaccagcacaccgccgattcgctg
cgcaaggccgcggccgaggccgtggccgccggtgtcggcggactgatgctcttcggtgtg
ccccggcccgaggacaaggacgcccgcggctccgcggcgagcgatcccgacggtgtgctc
aaccgcgcactgcgttcgttgcgcagcgaactcggcgactccacggtgatcatggccgac
acctgcctcgacgagttcaccgaccacggtcactgcggcgtgctcacaggttccggtgtc
gtcgacaacgacgcgacgctcgagcgctacgccgagatggccgtcgcgcaggccgaggcc
ggagcccacctgctggggccgagcggaatgatggacgggcagatcggtttcctccggtcc
gctctcgacgaggccggacacaccgaagtcgggcagctcgcctactccgcgaagtacgcc
tcggcgttctacggccccttccgcgacgccgtcggctcgtccctcgaaggcgaccgccgc
acctaccagcaggatccggcgaaccgccgggagtcgatgcacgaggtggatctcgatctc
gccgagggcgccgacatggtgatggtcaagccggcgatgtcgtatctcgacgtgctgcgc
gaggtcgccgaccgttcgcccgtcccggtggccgcctatcagatctccggggagtactcg
atgatcagcgcggccgcgcagaagggctggatcgaccgcgacgccgcgatcctcgaatcg
ctggtggggatccggcgtgccggcgccgacatcgtcctcacctactgggccgccgaggtc
gcgggtcgcctgtcatga
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