Piscinibacter gummiphilus: A4W93_05445
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Entry
A4W93_05445 CDS
T04831
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
rgu
Piscinibacter gummiphilus
Pathway
rgu00362
Benzoate degradation
rgu00624
Polycyclic aromatic hydrocarbon degradation
rgu01100
Metabolic pathways
rgu01120
Microbial metabolism in diverse environments
rgu01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rgu00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
A4W93_05445
00624 Polycyclic aromatic hydrocarbon degradation
A4W93_05445
Enzymes [BR:
rgu01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
A4W93_05445
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ARN19401
UniProt:
A0A1W6L4Z9
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All DBs
Position
1220131..1220823
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AA seq
230 aa
AA seq
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MRFDPIPEGTWPDLLHAPYKSTAKRGPTKAPLRVASPVATNQSLGFQPSLIVPGDTDLTT
RGQSAPLGEKIVVTGRVTDEDGKPVRNSLVEVWQCNAAGRYWHKKDQHNAPLDPNFFGFG
KFLTDNEGRYRFVTIKPGAYPWGNHSKAWRPAHIHFSLFGNVLAQRLVTQMYFPNDPLFD
FDPIFQSVPDVAARQRLVSRFSMDETVGDEMLGYVFDIVLRGRDATPFGL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcgaccccattcccgagggcacctggcccgacctgcttcacgccccgtacaag
tcgaccgcgaagcggggtccgacgaaggcgccgctgcgtgtcgcgtccccggtcgccacg
aaccagtccctcggtttccaaccctcgctgatcgttcccggcgacaccgacctgaccacc
cgcggccagtcggccccgctcggcgagaagatcgtggtgaccggccgcgtgaccgacgag
gacggcaagcccgtgcgcaactcgctcgtcgaggtgtggcagtgcaacgccgccggccgc
tactggcacaagaaggaccagcacaacgcgccgctcgacccgaacttcttcggcttcggc
aagttcctcaccgacaacgaaggccgctaccgcttcgtcaccatcaagcccggcgcgtac
ccgtggggcaaccacagcaaggcgtggcgtccggcgcacattcacttctcgctgttcggc
aacgtgctggcccagcgcctcgtgacgcagatgtatttcccgaacgacccgctgttcgac
ttcgaccccatcttccagagcgtgcccgacgtggccgcccgccagcgcctggtctcccgc
ttcagcatggacgagacggttggtgatgaaatgctgggctacgtgttcgacatcgtgctg
cgcggccgcgacgccacgccgttcggcctctga
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