Piscinibacter gummiphilus: A4W93_07265
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Entry
A4W93_07265 CDS
T04831
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
rgu
Piscinibacter gummiphilus
Pathway
rgu00071
Fatty acid degradation
rgu00280
Valine, leucine and isoleucine degradation
rgu00310
Lysine degradation
rgu00362
Benzoate degradation
rgu00380
Tryptophan metabolism
rgu00410
beta-Alanine metabolism
rgu00640
Propanoate metabolism
rgu00650
Butanoate metabolism
rgu00907
Pinene, camphor and geraniol degradation
rgu00930
Caprolactam degradation
rgu01100
Metabolic pathways
rgu01110
Biosynthesis of secondary metabolites
rgu01120
Microbial metabolism in diverse environments
rgu01200
Carbon metabolism
rgu01212
Fatty acid metabolism
Module
rgu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rgu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
A4W93_07265 (fadB)
00650 Butanoate metabolism
A4W93_07265 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
A4W93_07265 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
A4W93_07265 (fadB)
00310 Lysine degradation
A4W93_07265 (fadB)
00380 Tryptophan metabolism
A4W93_07265 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
A4W93_07265 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
A4W93_07265 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
A4W93_07265 (fadB)
00930 Caprolactam degradation
A4W93_07265 (fadB)
Enzymes [BR:
rgu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
A4W93_07265 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
A4W93_07265 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
A4W93_07265 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
A4W93_07265 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ARN19725
UniProt:
A0A1W6L606
LinkDB
All DBs
Position
1630401..1632548
Genome browser
AA seq
715 aa
AA seq
DB search
MFQGDSIQVRRLDDGFAELCFDRQGDAINKLDARTVDEFQRATSVIAADGDVRGVLVSSA
KDVFIVGADIAEFGEMFKQPAEHMARDVYAKNGIINAFEDLGVPSVVAINGFALGGGLEL
ALAASFRVMSNDAQVGLPEVKLGLFPGFGGTVRLSRVAGPAVAVEWIAGGRPSRAASALA
AGVVDQTCDPAALRETALTLLRSAADGHADWRARQQRKREPVPRQPAELRSLFDGALADV
DARSPKHQPAAAIAVRMMSRAVTCTRAEALRLESAAFAEVAKTQAAASLVRAFFNDQLLK
KRFKSYGQGARPVKSMAVLGAGIMGGGIAYTSALRGTPVRLKDIAPPPLALGMKEASRQL
ARQVKTGRIDQAKADAVLATIHPQLDDAGFGEVDLVIEAVVENLSVKHQVLSALEGAVRP
DTVIASNTSSLRIDDIARPLARPENFVGMHFFNPVPVMALVEVVRGERTSDAAVSTAVAH
AVRMGKTPVVVKDCPGFLVNRLITPYVSGFLQLLADGADFAEVDRVMEAFGWPMGPALLQ
DVVGMDTGGHVGDVIAAGYPQRMRPVTRNAVKLMVEHRRYGQKSGAGFYRHGLDPFGKPV
RSPDPEAQALVATLQLGGPRTFGEAEIVDRLMLPMVVEAAHALEEGVVATAAELDMALTL
GLGFPAYLGGALQYADWLGLAEVVARCERLAALGPAYEPTARMREMAATGGRFHG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
ttgttccaaggtgacagcatccaggtgcggcggctggacgacggtttcgctgaattgtgt
ttcgaccgccagggcgacgcgatcaacaagctcgacgcccgcaccgtcgacgagttccag
cgcgcgaccagcgtgatcgccgccgacggcgacgtgcgcggcgtgctcgtgtcaagcgcg
aaggacgtgttcatcgtcggcgccgacatcgccgagttcggcgagatgttcaagcagccc
gccgaacacatggcgcgcgacgtgtacgcgaagaacggcatcatcaacgcgttcgaggac
ctgggcgtgccgagcgtcgtcgccatcaacggtttcgcactgggcggcggtctcgagctg
gcgctcgcggcctcgttccgcgtgatgtcgaacgatgcgcaggtggggctgcccgaagtg
aagctcgggctgttcccgggcttcggtggcacggtgcgcctgtcgcgggtcgcggggccc
gcggtggcggtggaatggatcgccggcgggcggccgtcgcgtgcggcctcggccctcgcg
gccggcgtggtggaccagacctgcgaccccgcggcgctgcgcgagacggcgctgacgctg
ctgcgcagcgcggccgacggccacgccgactggcgcgcccgccagcagcgcaagcgcgag
ccggtgccgcgccagcccgccgagctgcggtcgctgttcgacggggcgctggccgacgtc
gatgcccgcagtcccaagcaccagcccgccgcggccatcgcggtgcgcatgatgtcgcgt
gcggtcacgtgcacgcgtgccgaggcgctgcggctcgagtccgccgcgttcgccgaggtg
gccaagacgcaggcggccgcgtcgctcgtgcgggcgttcttcaacgaccagttgctgaag
aagcgtttcaagtcctacggacaaggtgcgcggcccgtgaagtcgatggcggtgctgggc
gccggcatcatgggcggtggcatcgcgtacacgagtgcgctgcgcggcacgccggtgcgg
ctcaaggacatcgcaccaccaccgctcgcgctgggcatgaaggaggcgtcgcgccagctc
gcccggcaagtgaagaccggccgcatcgaccaggcgaaggccgacgcggtgctggccacc
atccacccgcagctggacgacgcgggcttcggcgaggtggacctggtgatcgaggcggtc
gtcgagaacctctccgtcaagcaccaggtgctgagcgcgctcgaaggggccgtgcggccg
gacacggtcatcgcgtcgaacacctccagcctgcgcatcgacgacatcgcccgcccgctc
gcgcggccggagaacttcgtcggcatgcacttcttcaacccggtgccggtgatggcgctg
gtggaggtggtgcggggcgaacgcacgagcgatgccgccgtgtctaccgcggtggcgcat
gccgtgcggatgggcaagacaccggtggtcgtgaaggactgcccgggtttcctcgtcaac
cgcctgatcacgccgtacgtgtcgggcttcctgcagctgctggccgacggcgccgatttc
gccgaggtggaccgcgtgatggaagccttcggctggcccatgggcccggccctgctgcag
gacgtcgtgggcatggacaccggtggccacgtgggcgacgtgatcgcggcgggctacccg
cagcgcatgcgcccggtgacacgcaacgcggtgaagctgatggtggaacaccggcgctac
ggccagaagagcggtgccgggttctaccggcacgggctcgacccgttcggcaagccggtg
cggtcgccggaccccgaggcgcaggcgctcgtcgccacgctgcaactcggcgggccgcgc
accttcggcgaggccgagatcgtggaccggctgatgctgccgatggtggtcgaggccgcc
cacgcgctggaggaaggtgtcgtggccaccgccgccgaactcgacatggcgctcacgctg
ggcctcggcttcccggcctacctgggcggggcgcttcagtacgccgactggctgggcctc
gccgaggtggtggcgcgctgcgagcggctggccgcgctcggtccggcgtacgaacccacg
gcacgcatgcgcgagatggcggccaccggcggccgcttccacggctga
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