Rodentibacter haemolyticus: IHV77_06480
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Entry
IHV77_06480 CDS
T07810
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rhae
Rodentibacter haemolyticus
Pathway
rhae00330
Arginine and proline metabolism
rhae00480
Glutathione metabolism
rhae01100
Metabolic pathways
rhae01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rhae00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
IHV77_06480 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
IHV77_06480 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
IHV77_06480 (speF)
Enzymes [BR:
rhae01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
IHV77_06480 (speF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QPB41593
LinkDB
All DBs
Position
complement(1343106..1345268)
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AA seq
720 aa
AA seq
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MPNLKIAYSPAVTKYFFTERNMVEITQTDFTDVGAIVLSSTDVAQFIESIKATEFNIPVF
VVQTNQQPLSTEFYNSVYHIQDFNGYDIQLYSRQIETAARLYEEKMLPPFFKMLSEYVEM
GNIAFDCPGHQGGQYFRKHPAGRFLYDFYGENIFRSDICNADVKLGDLLIHEGAACDAQK
HAAQVFNADKTYFVLNGTSSANKVALNAILAPGDLVLFDRNNHKSNHHGALVQAGATPIY
LETARNPFGFIGGIDNHCFEESYLRALIKETAPESADKKRPFRLAVIQLGTYDGTIYNAR
QVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGFS
QASQIHKKDKHIKGQSRYVNHKRFNNAFMLHASTSPFYPLFATLDVNAKIQGSAAGRRLW
HDCVKVGIEARKLVLNNCELIRPFIPTTIKGKKWQDYDTEEIATNLEFFKFHPTDTWHKF
EGYEDEQYFVDPCKFLLTTPGISLETGEYESFGIPATILANYLRENGIIPEKCDLNSILF
LLTPAETLTKMQTLVAQIALFEKHIKQNSLLQDVLPTVYQNNEERYRGYTIRQLCQEMHD
LYVSRNVKQLQKDLFRKATLPEYAMNPRDANIELIRNNVELVSLTDIVGRIAAEGALPYP
PGVLCVVPGERWSTTAQQYFLALEEGINTLPGFAPEIQGVYLQKDPDGRIRAYGYVLNEH
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatttaaaaattgcatatagtccggctgtaactaaatatttctttactgaaaga
aatatggtggaaataacacaaacagatttcactgatgttggcgctattgtgttaagttca
actgatgttgctcagtttattgaatcaattaaagcaacggaatttaatattcctgttttt
gtggttcaaacgaaccaacagccgctttcaactgaattttataattcggtttatcatatc
caagattttaatggctatgacattcaactttatagtcgccaaattgaaaccgcagccaga
ctttacgaagaaaaaatgcttcctcctttcttcaaaatgcttagcgaatacgtggaaatg
gggaatattgctttcgattgtccgggacatcaaggcggtcaatatttccgtaaacacccg
gcaggtcgtttcctttatgacttctacggagaaaatattttccgttcggacatttgtaat
gccgatgtgaaattgggcgatttactcattcacgaaggcgcggcttgcgatgcgcaaaaa
cacgcggcacaagtatttaatgcggacaaaacttattttgtattaaacggtacgtcatca
gcaaataaagtggcattaaatgctattttagcaccgggtgatcttgttttattcgatcgt
aataatcacaaatcgaatcaccacggtgcgttagttcaagccggtgcgacacctatttat
cttgaaaccgcacgtaatccgttcgggtttatcggtggtattgataaccattgttttgaa
gaaagctatttaagagcgttaatcaaagaaaccgcacctgaaagcgcagataaaaaacgc
ccgttccgtttggcggtcattcaattgggaacttacgacggtacgatctataacgcacgt
caagtcgtggataagatcggtcatctttgtgattacattctatttgactccgcttgggta
ggttacgaacaattcattccaatgatgaaagattgttctcctcttttgttggaactaaat
gaaaacgaccctggtattatcgtgacacaatccgttcacaaacaacaagccggtttctca
caagcttctcaaattcacaaaaaagataaacatatcaaaggtcaaagccgctatgttaac
cataaacgctttaacaatgcctttatgctgcacgcatcaaccagtccgttctacccatta
tttgcaacacttgatgtgaacgcaaaaattcaaggtagcgctgccggtcgccgtttatgg
catgactgtgtaaaagtggggatcgaagcccgtaaacttgttttgaataattgcgaactt
attcgtccgtttattccaacaacaataaaaggtaaaaaatggcaagattacgatactgaa
gaaatcgctacgaatcttgaatttttcaaattccacccaaccgacacatggcataaattt
gaaggttatgaagacgagcaatacttcgttgatccttgcaaattcttgctaaccacaccg
ggtattagcttagaaacaggcgaatatgagtctttcggtattcctgccaccatcttagcc
aactatttgcgtgaaaacggtattattccggaaaaatgcgatttgaactctatcctattt
ttgttaacgcctgctgaaaccttaacaaaaatgcaaaccttagtcgcccaaatcgcattg
tttgagaaacatatcaaacaaaactccctattacaagacgtattaccaacggtttaccaa
aataacgaagaacgttacagaggttataccattcgccaattatgtcaggaaatgcacgat
ctttatgtaagccgtaatgtaaaacaattacaaaaagatttattccgtaaagcaacctta
cctgaatacgcaatgaaccctcgcgatgccaatatcgaattaattcgtaacaatgtggaa
ttagtttcattaacggacattgtgggcagaattgcggctgaaggcgcacttccttatcct
cccggcgttttatgtgtagtaccgggggaaagatggagtactaccgctcaacaatatttc
ttagcgctagaagaagggattaatactctgccgggcttcgcaccggaaatccaaggggtc
tatttacaaaaagatcctgacggacgcatccgtgcatacggttatgtattaaatgaacat
taa
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