Candidatus Rhabdochlamydia oedothoracis: RHABOEDO_001158
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Entry
RHABOEDO_001158 CDS
T07398
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rhaw
Candidatus Rhabdochlamydia oedothoracis
Brite
KEGG Orthology (KO) [BR:
rhaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhaw03009
]
RHABOEDO_001158
Enzymes [BR:
rhaw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RHABOEDO_001158
Ribosome biogenesis [BR:
rhaw03009
]
Prokaryotic type
ribosomal protein modification factors
RHABOEDO_001158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QYF48919
LinkDB
All DBs
Position
1181171..1182559
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AA seq
462 aa
AA seq
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MKYPSQLKTLKNKIHFTSLGCARNLVDTEVMLGMVLKAGYQITDQLNEADFLVVNTCGFL
ASARQESIGSVHNFFQEKKTEAKVIVAGCMVQKHKDQLKEQFPHIHYFLGSGDVEKILEA
IIADSPGEAVSNARSYLEWGEIPRQLSTPKHYAYLKIAEGCAKQCAFCIIPKIKGRLRSK
PIPQILKEFRALVSQGVKEVILIAQDLGDYGKDLVDKQGLENVISLLLSEKGSFWLRLLY
LYPDEITDGLIALMKADKRICPYLDMPIQHISNRILKAMKRKTSKQQIIETIGKLRKNVP
NVVIRTSLMVGFPSETEEEVDELIEFIQKHPIEHIGIFKYSCEEQSTSAKLPDHIVEEVK
QARFDRVAKAQMQVITQRNQKYIGQKIPVIIEDTHPDSPYLLCGRFSGQAPEIDGMVIIN
DARKVKNVPELYEVEITDVADYDLIGKAIRSLEKKTSLNMVV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacccttctcagttaaaaacattaaaaaataaaattcactttactagccttgga
tgtgcccgaaacctagtggataccgaggttatgttaggaatggtgctaaaggctggctat
cagattacagatcagcttaatgaagcagattttctagtggttaatacttgtgggttttta
gcctctgctagacaagagtctatcggttcggtacataactttttccaagagaaaaaaaca
gaggcaaaggtcattgtggctggttgcatggtgcaaaaacataaagaccagctcaaagag
caatttcctcatattcattactttttaggctctggggatgtggaaaaaattttagaagcc
attatagctgatagtcctggagaagcggtatctaatgcccgtagctatttggaatggggt
gagataccaagacagctatccacaccaaagcattatgcttatttaaaaatagcagaagga
tgcgccaaacaatgcgctttttgcattatccccaagattaaaggccgcctgcgtagtaaa
cctatacctcaaattcttaaagaatttcgtgctcttgtttctcaaggggtaaaggaagtg
attttaatcgctcaagatttaggggactatggcaaagacctagtcgataaacaaggatta
gagaatgtgatctctcttcttttatctgaaaaaggttctttttggttaaggttattatac
ctttatcctgatgagatcaccgatgggttaattgctttaatgaaagctgataagagaatc
tgtccttatttagatatgcccattcagcatattagtaatcggatcttaaaagctatgaaa
cgaaaaacctctaagcaacagattattgaaacaataggaaagttgcgcaagaatgttccg
aatgtggtcattcgtacaagcttaatggtgggattcccttcagaaacagaggaagaagtg
gatgaacttattgagtttatccaaaaacatcctatcgaacatattgggatttttaagtat
tcctgcgaggaacaatctacttctgcaaagctgccagatcatatagtagaagaagtaaaa
caggctcgttttgatagagtagcaaaggcgcaaatgcaggttattacccaaagaaatcaa
aaatatatagggcaaaaaatacctgttattatagaagacactcatcctgattccccctat
cttctatgtggaaggttttctgggcaagcaccggagattgatggtatggtaattatcaat
gacgctcgcaaggtaaaaaatgtgcccgagttatatgaagtggaaatcacagatgtcgct
gattatgatttgattggaaaagccattcgatctttagagaaaaaaacctcacttaatatg
gttgtatga
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