Rhodovulum sp. P5: RGUI_1945
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Entry
RGUI_1945 CDS
T04813
Name
(GenBank) N-succinyl-L,L-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc00300
Lysine biosynthesis
rhc01100
Metabolic pathways
rhc01120
Microbial metabolism in diverse environments
rhc01230
Biosynthesis of amino acids
Module
rhc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RGUI_1945
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhc01002
]
RGUI_1945
Enzymes [BR:
rhc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RGUI_1945
Peptidases and inhibitors [BR:
rhc01002
]
Metallo peptidases
Family M20
RGUI_1945
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ARE40086
UniProt:
A0A1V0PVC8
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Position
complement(1846998..1848146)
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AA seq
382 aa
AA seq
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MTDPADPIALTAELIRCRSVTPTEGGALRLVEARLAAAGFECHRADRGGVANLFARWGGK
GHPKTFGFNGHTDVVPAGDTAAWTADPFGADRRDGWLWGRGATDMKSGVAAFVAAAIDFV
TETPPEGAIVITLTGDEEGDAVDGTTAILDWMATQGEHMSACLVGEPTSREDMGDMMKIG
RRGSMTAYFTAHGRQGHAAYPHRAQNPIPAMARLVERLAAYPLDEGTPHFDPSTLAVTTF
DTGNPATNVIPGVCHATVNIRFNEVHSSDSLTDWLRAEADKITEETGIRFDMEIKVSGES
FLTPPGPLSDLVASAVEAETGRRPELSTSGGTSDARFVKDFCPVVEFGLVGKTMHQVDER
VEIAQIETLTRIYSRILSGYFA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccagccgacccgattgccctgaccgccgagttgatccgctgccggtcggtg
acccccacggaaggcggcgcgctgcggctggtcgaggcccggcttgccgccgcggggttc
gaatgccaccgggccgaccgcggtggcgtggcgaaccttttcgcgcgctgggggggcaag
gggcacccgaagaccttcgggttcaacggtcacaccgatgtcgtgccggcgggcgacacc
gccgcatggacggccgacccgttcggggcggaccggcgcgatggttggctatgggggcgg
ggtgcgaccgacatgaaatcgggcgttgcggccttcgtggcggcggccatcgacttcgtg
accgagacaccgccagagggcgccatcgtcatcacgctgaccggggacgaggaaggcgac
gccgtcgacggcacgaccgcgatactcgactggatggcgacgcaaggggagcatatgtcg
gcctgccttgtgggagagccgaccagccgcgaagacatgggcgacatgatgaagatcggg
cggcgcggctcgatgactgcctatttcacggcgcatgggcggcagggccatgccgcctat
ccgcaccgggcgcaaaacccgatcccggcgatggcccggctggtggagcggctggccgcc
tatccgctggacgagggcacaccgcatttcgacccctcgacgcttgcggtgacgaccttc
gacaccggcaatccggcgaccaacgtgattccgggtgtctgccatgccaccgtcaacatc
cgcttcaacgaggtgcattcctccgacagtctgaccgactggcttcgggcggaggccgac
aagattaccgaagaaaccggcatccgctttgacatggagatcaaggtgtcgggcgaaagc
ttcctgaccccgccggggccgctgtccgatctggtggccagcgcggtggaggctgaaacc
gggcggcggccggagttgtcgacctcgggtggcacgtcggatgcccgtttcgtcaaggat
ttctgcccggtggtggaattcggccttgtgggcaagaccatgcaccaggtcgatgagcgg
gtggagatcgcgcagatcgagaccctgacgcggatctacagccgcatcctgtcgggctat
ttcgcctga
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