Rheinheimera sp. F8: ATY27_13395
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Entry
ATY27_13395 CDS
T09854
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rhei
Rheinheimera sp. F8
Brite
KEGG Orthology (KO) [BR:
rhei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhei03009
]
ATY27_13395 (rimO)
Enzymes [BR:
rhei01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ATY27_13395 (rimO)
Ribosome biogenesis [BR:
rhei03009
]
Prokaryotic type
ribosomal protein modification factors
ATY27_13395 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
ALZ76653
UniProt:
A0A0U4W423
LinkDB
All DBs
Position
complement(3008283..3009596)
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AA seq
437 aa
AA seq
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MSQPKVGFVSLGCPKNLVDSERILTQLKIEGYNIVPSYDDAELVIVNTCGFIDSAVQESL
DTIGEALAENGKVIVTGCLGAREDEIRQVHPNVLGITGPHAYENVLSQVHQFVPKPKYDP
FLQLVPDTGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLDEAQRLKNA
GVKELLVISQDTSAYGVDVKHRTGFWNGAPVKTSMQSLCEALSEMGIWVRLHYVYPYPHV
DDVIPLMAEGKLLPYLDIPFQHASPRILKLMKRPGQAERTLERIKKWREICPELTIRSTF
IVGFPGETEEEFQELLDFLEQAQLDRVGCFKYSPVEGAKANELPDPVPEEIKEDRYHRFM
ATQQKISAARLQAKIGRTIEVLIDEVDDEGAIGRSFADAPEIDGAVYLNGETTLKPGDVV
KAVVEAADEYDLWANRL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacctaaagttggttttgtcagtctgggctgtcccaagaacctggtagattct
gagcggatcctgacgcagctcaaaatcgaaggctacaacatagtcccaagctacgacgac
gctgaactcgtgatcgtcaatacctgtggttttatcgacagtgccgttcaggaatcactg
gacactatcggtgaagcgctggcagaaaatggcaaagtcattgtgaccggctgtcttggt
gcccgggaagatgaaattcgtcaggtacacccgaacgtgctcgggatcaccgggccacac
gcctatgaaaatgtgctgagtcaggtacaccagtttgtccctaagcctaaatacgaccca
ttcctgcagctggtgccggataccggcgtcaagctgacgccaaaacattacgcttattta
aagatttccgaaggctgcaaccaccgttgtactttctgcattattccatcgatgcgcggt
gatttggtcagtcgcccgatcggtgaagtgctcgatgaagcgcagcgcctgaaaaatgcc
ggcgtcaaagagctgttggtgatttctcaggacaccagcgcgtatggcgtcgacgtcaag
caccgcacgggcttctggaatggcgcgccggtcaaaacttccatgcagtcgttgtgtgaa
gccttgtctgagatgggcatttgggtgcgtctgcattatgtctatccatacccgcacgtc
gacgatgtgatcccgctgatggccgagggtaaactgctgccctacctcgacattccgttt
caacacgccagcccacgcattctgaagctgatgaagcgacctggtcaggctgagcggacg
ttagagcggatcaaaaaatggcgcgagatctgccctgagctaacgattcgttctactttt
atcgttggttttccgggtgaaacagaagaagagtttcaggagttactggattttctcgag
caagcacagctggaccgcgtcggttgttttaaatacagcccggtcgaaggcgctaaagcc
aatgaattaccggatccggtgccggaagaaatcaaagaagaccgttatcaccgctttatg
gcaacgcagcaaaaaatcagtgctgcgcgactgcaagcgaaaatcggccgtactatcgaa
gtgctgattgatgaagtcgatgacgaaggcgccattggccgcagtttcgctgacgcccct
gaaattgacggtgccgtctatttaaatggcgaaacaacgctgaaacccggtgacgtggtg
aaagcagttgttgaagctgccgacgaatatgatttgtgggctaaccgactctaa
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