Rodentibacter caecimuris: FEE42_06950
Help
Entry
FEE42_06950 CDS
T06473
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rhey
Rodentibacter caecimuris
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhey03009
]
FEE42_06950 (rimO)
Enzymes [BR:
rhey01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FEE42_06950 (rimO)
Ribosome biogenesis [BR:
rhey03009
]
Prokaryotic type
ribosomal protein modification factors
FEE42_06950 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
DUF1732
Motif
Other DBs
NCBI-ProteinID:
QIA77112
UniProt:
A0A858BD00
LinkDB
All DBs
Position
complement(1380527..1381864)
Genome browser
AA seq
445 aa
AA seq
DB search
MQNSTPNIGFVSLGCPKNLVDSERILTELRSDGYNIVPNYENVDLVIVNTCGFIDSAVQE
SLEAIGEALEENGRVIVTGCLGAKEDRIREVHPKVLEVSGPHSYEAVMAQVHKYVPKPTH
NPYFSLVPKQGVKLTPKHYAYLKISEGCDHRCTFCIIPSMRGDLESRSITQVLEEAKRLA
EAGVKELLVVSQDTSAYSLDLKRQEGGVKTSFWNGMPIKNDLMTLCKQLGKLGIWVRLHY
VYPYPHVDDLIPLMADGTLLPYLDIPLQHASPKILKAMKRPGSIDRTLERIKKWREICPD
LTLRSTFIVGFPGETEEDFQLLLDFLKEAQLDRVGCFKFSPVEGAPATDMLDQVSEEVKE
ARFHRFMQLQQKISAERLTQKVGKTLDVLVDEIDEEGIIGRSKADAPEVDGLVYVENISG
MDVKVGDVIKVTITQSDEYDLWGTC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattcaaccccgaatattggctttgtgagcttgggttgtcctaaaaacttagtg
gattctgaacgtattctgacagaattacgtagtgatggttacaatatcgtaccgaattat
gaaaacgttgatttggtgatcgtcaatacatgcggttttattgatagcgcagtgcaagaa
tctttagaagccatcggagaggcgttagaagaaaatggtcgggtgattgttaccggttgt
cttggtgcaaaagaagatcgtattcgtgaggtacacccgaaagtattggaagtctccggc
cctcatagctatgaagctgtaatggctcaagtacataaatacgtgccgaaaccgacacat
aatccttactttagccttgtgcctaaacaaggggtgaaattaaccccaaaacattatgct
tatttgaagatttctgaaggctgtgatcatcgctgcacattttgcattataccttccatg
cgtggtgatttggaaagccgctctatcactcaggtattagaggaagccaaacgtttagct
gaagccggggtgaaagagttgctcgtcgtatcgcaagatacttccgcctattctctggat
ttaaaacgccaagagggaggggtaaaaacctcattctggaacggaatgccgattaaaaac
gatttaatgacactttgtaaacagctaggaaaactcggcatttgggtgcgtttgcattat
gtttatccgtatccacacgttgatgatttaatccctcttatggcagacggtacgttactg
ccttatttggatattcctttgcagcacgccagcccgaaaattctcaaagcaatgaaaagg
ccgggaagtattgaccgcactttagagcggattaaaaaatggcgtgaaatttgccccgat
ttaaccttgcgttccacctttattgtggggttcccgggggaaacggaagaggattttcaa
ttattacttgatttcttaaaagaggcccaactcgatcgtgtcggctgttttaaatttagt
ccggtggaaggcgcgcctgcaacggatatgctggatcaagtgtcggaagaggttaaagaa
gcacgcttccatcgctttatgcaattacaacagaaaatttcagccgagcgtttaacacaa
aaagtgggaaaaaccttagatgtattggtcgatgaaatagatgaagaaggtatcatcgga
cgttccaaagcggatgcaccggaagtggatggtctggtttatgttgagaatatcagcggc
atggatgtgaaagtcggtgatgtcattaaagttactattacccaatcagatgaatatgat
ctgtggggaacttgttaa
DBGET
integrated database retrieval system
