Rhodoferax sediminis CHu59-6-5: EUB48_09200
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Entry
EUB48_09200 CDS
T06165
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhf03009
]
EUB48_09200 (rimO)
Enzymes [BR:
rhf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EUB48_09200 (rimO)
Ribosome biogenesis [BR:
rhf03009
]
Prokaryotic type
ribosomal protein modification factors
EUB48_09200 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
QDL37428
UniProt:
A0A515DAJ1
LinkDB
All DBs
Position
1909931..1911349
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AA seq
472 aa
AA seq
DB search
MSEAISPVRKSSAIPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADLVIVNTC
GFIDDAVKESLDTIGEALAENGRVIVTGCLGAKKVSGAAGEGDVNLVRKMHPSVLAVTGP
HATQEVMDAVHLNLPKPHDPFLDLVPNSFGIAGIKLTPRHYAYLKISEGCNHRCTFCIIP
SMRGDLVSRPIGDVLGEARALFAGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRML
ELVQALGEIAEPYGAWVRLHYVYPYPSVDEVISLMATGSVLPYLDVPFQHSHPDVLRRMK
RPASGEKNLERLARWREMCPEIVVRSTFIAGFPGETEEEFTHLLDFMREAQIDRAGCFAY
SPVDGAAANDIPGMLPLALREERRARFMAVAEAVSAAKLQRRVGATMQVLVDSAPGMGKK
GGIGRTYADAPEIDGTVKLLPPEKISKTLKVGEFTKARIVGTQGHDLVAVPF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagctatatctcctgtgcgcaaatcgtcggccattcccaaagtgggctttgtc
agcctgggctgtcccaaggcactgaccgattccgaattgatcctcacccagctcagtgcc
gagggctaccagacctccaagaccttcgaaggcgccgatctggtgatcgtgaatacctgc
ggcttcattgacgacgccgtcaaggaaagcctggacaccattggcgaagcgctggccgag
aacggccgggtcatcgtgacgggctgcctcggcgccaaaaaggtgtcgggcgccgcgggc
gagggcgatgtgaacctggtgcgaaagatgcaccccagcgtgctggctgtgacgggtccg
cacgccacgcaggaagtgatggatgcggtgcatttgaacctgcccaagccgcatgatccc
tttctggacctggtacccaactcgttcggcattgcgggcatcaagctcacgccgcggcac
tacgcgtacctgaagatcagcgaaggctgcaaccaccgctgcacgttttgcatcattccg
tcgatgcgcggcgatctggtctcgcgccccatcggggatgtgttgggcgaggcgcgtgcc
ctgttcgcgggcggcgtgaaggaactgctggtgatcagccaggacacctcggcctatggc
gtcgacgtgaagtaccgcaccgggttctgggatggcaagccggtcaagacccgcatgctg
gagctggtccaggcgctgggcgagattgcggagccctacggcgcctgggtccggctgcac
tatgtgtatccgtacccgagcgtggatgaggtgatctcgctgatggccaccggcagcgtg
ttgccctatctggacgtgccgttccagcacagccaccccgatgtgctcaggcgcatgaag
cgtccagccagcggtgaaaaaaatctggagcggctcgcgcgctggcgcgagatgtgtccc
gagatcgtggtgcgcagcaccttcatcgccgggtttccgggcgagaccgaggaggagttt
acgcacctgctggacttcatgcgcgaggcgcagattgaccgcgcgggctgctttgcctat
agcccggtggatggcgcggcggccaacgacattcccggcatgctgcctctggcgctgcgc
gaggaacggcgcgcgcgcttcatggcggtggccgaggccgtgtcggcggccaaactgcaa
aggcgcgtgggcgccacgatgcaggtgctcgtcgattcagcgccgggcatggggaaaaag
ggcggtatcggtcgaacctacgccgacgcgcccgagatcgatggcacggtgaagctgctg
ccacccgagaagatcagcaagacgttgaaggtcggggaattcaccaaagcgcggattgtt
ggaacacaagggcatgacctcgttgccgtgcctttttga
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