Rhodoferax sediminis CHu59-6-5: EUB48_13045
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Entry
EUB48_13045 CDS
T06165
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf00053
Ascorbate and aldarate metabolism
rhf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
EUB48_13045 (garD)
Enzymes [BR:
rhf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
EUB48_13045 (garD)
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Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
QDL38109
UniProt:
A0A515DCJ9
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All DBs
Position
2707930..2709519
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AA seq
529 aa
AA seq
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MTAPSSSPPLYITMHKHDNVAIVANDGGLPAGTVFASGLKLIDKVPQGHKVALLDLPAGT
PVRRYNVVIGRTTRDVPAGSWVHERLLEMPAARSLEGLPIATAKLPAMPPLEGYTFEGYR
NADGSVGSRNILAITQTVQCVAGVTAFAVQRIKAELLPRFPHVDDVVALEHGYGCGVAID
APGATIPIRTLRNISLNPNFGGEVMLVSLGCEKLQPRRLMPPGTIALVDENSVADVGVNA
DARLDVVCLQDEAHVGFMSMVESIMRQAEEHLERLNARRRETVPASELVVGVQCGGSDAF
SGVTANPAVGFCTDLLVRAGATVMFSEVTEVRDGIDQLTARAATPEVAAAMIREMAWYDA
YLQKGHADRSANTTPGNKMGGLSNIVEKAMGSIVKSGSAPISGVLAPGEKVRKKGLIFAA
TPASDFICGTLQLAAGINLHVFTTGRGTPYGLAQVPVIKVATRSDLARRWHDLMDVNAGR
IADGSASIEEVGWELFRLMLEVASGTKKTWAEHWKLHNALVLFNPGPVT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgacagccccctcgagttcgccgccgctgtacatcaccatgcacaagcacgacaacgtc
gcgatcgtcgccaacgacggcggcctgccggcaggcaccgtgtttgcatcaggcctcaag
ctcatcgacaaggtgccgcagggtcacaaggtcgcgctgctcgacctgccggccggcacg
ccggtgcggcgctacaacgtggtgatcgggcgcacgacgcgcgacgttccggcgggcagc
tgggtgcacgagcgcctgctcgagatgcccgcggcacgctcgctcgaaggcctgccgatc
gccaccgccaagctgcccgcgatgcccccgctcgagggctacaccttcgagggttatcgc
aatgccgacggctcggtgggctcgcgcaacatcctggcgatcacccagaccgtgcagtgc
gtggccggcgtgaccgcgttcgccgtgcagcgcatcaaggccgagctgttgccccgcttt
ccccacgtcgacgacgtggtggcgctggagcacggctacggctgcggcgtcgcgatcgat
gcacccggcgcgaccatcccgatccgcacgctgcgcaacatcagcctgaatccgaacttc
ggcggcgaggtgatgctggtcagcctgggctgcgagaagctgcagcccaggcgcctcatg
ccgcccggcaccatcgcgctcgtggacgagaacagcgtggccgatgtcggcgtcaacgcg
gatgccagactcgacgtggtctgcctgcaggacgaggcgcatgtgggcttcatgtcgatg
gtcgagtccatcatgcgccaggccgaggaacacctggagcgcctgaacgcgcgccggcgc
gaaaccgtgccggccagcgagttggtggtgggcgtgcagtgcggcggcagcgatgcgttc
agcggcgtgacggccaaccccgcggtcggcttttgcaccgacctgctggtgcgggccggc
gccaccgtgatgttctcggaagtgaccgaggtgcgcgacggcatcgaccagctgaccgcg
cgcgcggctacgcccgaggtggccgcggccatgatccgcgagatggcctggtacgacgcc
tacctgcaaaaggggcacgccgaccgcagcgccaacaccacgcccggcaacaagatgggc
ggcctgtccaacatcgtcgagaaggccatgggctcgatcgtcaagtccggcagcgccccg
atctcgggcgtgctcgcgcccggcgagaaggtgaggaagaagggcctgatcttcgccgcc
acgccggccagcgacttcatctgcggcacgctgcagctggcggccggcatcaatctgcac
gtgttcacgaccgggcgcggtaccccctacgggctggcgcaggtgccggtcatcaaggtg
gccacgcgcagcgacctcgcacggcgctggcacgacctgatggatgtgaatgcggggcgt
atcgccgacggctccgccagcatcgaagaggtgggctgggagttgttccgcctcatgctc
gaggtcgcgagcggcaccaagaaaacctgggccgagcactggaagctgcacaacgcgctg
gtgctgttcaatccggggcccgtgacctga
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