Rhodoferax sediminis CHu59-6-5: EUB48_14385
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Entry
EUB48_14385 CDS
T06165
Name
(GenBank) ATP-grasp domain-containing protein
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Pathway
rhf00907
Pinene, camphor and geraniol degradation
rhf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EUB48_14385
Enzymes [BR:
rhf01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
EUB48_14385
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
DUF3182
BiPBP_C
HlyD_3
Peptidase_M23
LAL_C2
Motif
Other DBs
NCBI-ProteinID:
QDL38344
UniProt:
A0A515DD59
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Position
complement(2979887..2981998)
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AA seq
703 aa
AA seq
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MKRILIANRGEIARRVIRTAHAMGIETVAVYADPDATALHVREATLAFALGGTTSAESYL
RVERLLEAARATGADAIHPGYGFLSEDARFAQAVQDAGLCWIGPPPAAIRALGSKSAAKA
LAAAQGVPCLPGYAGEDQSDGRFAAEAERVGYPVMVKAVAGGGGRGMRQVSEAAQLPAAL
ASARSEALAGFGNGELLIERALLHPRHVEVQVFADTHGHCIHLGERDCSVQRRHQKIIEE
SPSPAVDAALRERMGACAVALAQGAGYVGAGTVEFLLEGEDVSPPGRPKAKHAPSGGSAA
HAVASVGAQFFLMEMNTRLQVEHPVTEALTGLDLVEWQIRVARGEPLPLAQHEVRLQGHA
IEVRLCAEDERFTPHTGRVLHFAAPLSTEFTSAFAVAPLNASARPTLRFDHAIERGSEVT
PHYDAMLGKLIAHAATREAAIDALVQALGQTELLGLPTNRAFLAECLAHPQFRAGQALIS
FLAGEADAVRDVLLKKELLAHSQYGLAAVLTQNWTDLGLPCSFPRPLRLRHRDTTMSLAV
QALGAGRWQVQPAGSRTPAAQPLQITALPDGAVQCVQGGVAQRVQVAHAGGQRWHLQAGA
VDWWLDDVSLLPAARAGAGTGATELRAPFNGRVVNVAAVVGRALAAGDTAVVIESMKLEH
SLAGTAAATVAEVLVSPGQQVAPGQVLVRFAALMPAASGETRA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatcctgatcgccaatcgcggggagattgcaaggcgcgtcatccgcacggcg
catgccatgggcatcgagaccgtggccgtgtatgccgaccctgatgcgactgcgctgcat
gtgcgcgaggccacgctggcctttgcgctgggcggcaccacgtcggccgagagttatctg
cgcgtggagcggctgctggaggccgcgcgcgcgacaggcgccgacgccatccaccccggc
tacggctttctgagcgaggacgcccgctttgcccaggccgtgcaggatgccggcctgtgc
tggatcggcccgccgcccgccgccatccgtgcgctgggcagcaagtcggcggccaaggcg
ctggccgcggcgcagggcgtgccgtgcctgccgggctatgcgggcgaggaccagagcgac
ggacgttttgccgccgaggctgagcgcgtcggctaccccgtcatggtcaaggccgtggcg
ggtggcggcgggcgcggcatgcggcaggtatcggaggccgcgcagttgcccgccgcgctg
gccagcgcgcgctccgaggcgctggccggctttggcaatggcgaactgctgatcgagcgc
gctctcttgcatccgcgccatgtcgaggtgcaggtgtttgccgatacgcacggccattgc
attcatctgggcgagcgcgactgctccgtgcagcggcgccatcagaaaatcatcgaggaa
agccccagcccggccgtggacgccgccctgcgcgagcgcatgggcgcctgcgccgtggcg
ctggcccaaggcgccggctacgtgggcgcgggcacggtggagttcctgctggagggggaa
gacgtttcgccgccgggccgccccaaggcgaaacacgccccctcggggggcagcgcagca
cacgcagtggcaagcgtgggggcccaattttttttgatggagatgaacacccggctgcag
gtcgagcacccggtgaccgaagcgctcacgggactggacctggtcgagtggcagatccgc
gtggcgcgcggcgagccgctgccgctggcgcagcacgaggtgcggctgcagggccacgcg
atcgaggtgcgcctgtgcgccgaggacgagcgattcacgccgcacacggggcgcgtgctg
cactttgccgcgcccttatcgaccgaattcaccagcgcgtttgcggtggcacctttgaat
gccagtgcacgccccacgctgcgtttcgaccacgcgatcgagcgcggctccgaggtcacg
ccgcactacgacgccatgctgggcaagctcatagctcacgccgccacgcgcgaggccgcc
atcgacgcgctggtgcaggcgctgggacagaccgagttgctgggcctgccgacgaatcgc
gcctttctggccgagtgcctggcgcatccgcagttccgcgcggggcaggcgctgatctcc
ttcctggccggcgaggccgatgcggtgcgcgatgtgctattgaaaaaggagctactggcg
cacagccagtatgggctagcggcagttttgactcaaaactggactgatctgggcttgccc
tgttctttcccgcgcccgctgcgcctgcggcatcgcgacaccaccatgtcgctggccgtg
caggcgctgggcgccggccgttggcaggtgcagcctgccggcagtcgtacgccagccgct
cagccattgcagatcacggccttgccggatggcgccgtgcagtgcgtgcaaggcggcgtg
gcgcagcgcgtgcaagtcgctcacgcggggggccaacgctggcacctgcaggcgggcgcg
gtggactggtggctggacgatgtctcgctgctgcccgctgcgcgtgccggtgcgggcacg
ggcgccaccgagctgcgcgcacccttcaacggccgcgtggtgaacgtggccgccgtggtg
ggccgggcgctggccgcgggcgacacggccgtggtgatcgaatcgatgaagctggagcac
agcctggccggcacggccgccgccactgtggccgaggtgctggtcagccccggccagcag
gtcgcgcccggccaggtgctggtgcggtttgcggcactcatgccggccgccagcggggag
acacgcgcatga
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