Sinorhizobium fredii NGR234: NGR_b12870
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Entry
NGR_b12870 CDS
T00888
Symbol
deoC
Name
(GenBank) deoxyribose-phosphate aldolase
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00030
Pentose phosphate pathway
rhi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
NGR_b12870 (deoC)
Enzymes [BR:
rhi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
NGR_b12870 (deoC)
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Motif
Pfam:
DeoC
Motif
Other DBs
NCBI-ProteinID:
ACP22738
UniProt:
C3KRN0
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All DBs
Position
pNGR234b:1274386..1275396
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AA seq
336 aa
AA seq
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MEDLAVKAGAVSAKPAGTGHNWPRNDGVDLDLSWVLDQRVNLSAAERRVATLPGRRTVKK
DAQAAWLLKAVTCIDLTTLNGDDTTERVKRLCAKARRPVRQDLLDALGMGDRDITTGAIC
VYHRFVSTAVEALDGSGIPVAAVSTGFPAGLVPHGLKLKEIEASVADGAREIDIVITREH
VLTGNWQALYDEMRDFRDACGDAHVKAILATGDLKTLRNVARASLVCMMAGADFIKTSTG
KEGVNATLLVTLVMLRMIRAYQERTGIKVGYKPAGGISAAKDVLNYQFLMKEELGREWLE
PDLFRVGASSLLADIERQLEHHVSGAYSALNRHPIG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaccttgctgtgaaggcgggggcggtttccgccaagcccgctggcaccggtcac
aactggccgcgcaacgacggtgtcgatctcgacctttcctgggtgctggaccagcgcgtc
aatctttccgctgccgagcggcgtgtcgcaacgctgccgggccgccgcaccgtgaagaag
gatgcgcaggccgcctggctcttgaaggcggtcacctgcatcgacctgaccacactcaac
ggcgacgatacgacggagcgcgtcaagcggctctgcgccaaggcgcgccggccggtgcgc
caggatcttctcgacgctctcgggatgggcgatcgcgacatcacgacgggggcgatctgc
gtctatcaccgtttcgtctcgacggcggtcgaggcgctcgatggctccggcatcccggtc
gccgcggtctccaccggctttccggccggcctcgtgccgcacggcctcaagctcaaggaa
atcgaggcctcggtcgccgacggcgccagggaaatcgacatcgtcatcacccgcgagcat
gtgctgaccggtaactggcaggcgctctatgacgagatgcgcgacttccgcgacgcctgc
ggcgatgcgcatgtcaaggcgatcctcgcgaccggcgacctcaagaccttgcgcaatgtc
gcccgcgcctcgctcgtctgcatgatggcgggggccgacttcatcaagacctcgaccggc
aaggaaggggtgaacgcgacgctgctcgtcacccttgtgatgctgaggatgatccgcgcc
tatcaggagcgcaccggcatcaaggtcggctacaagcctgccggcggcatctcggcggcg
aaggacgtgctgaactaccagttcctgatgaaggaagagctcggccgggaatggctcgag
ccggatctcttccgcgtcggggcatcgagcctgctggccgatatcgagcgccagctcgaa
catcatgtcagcggcgcctattcggccctcaacagacacccgattggataa
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