Sinorhizobium fredii NGR234: NGR_c15790
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Entry
NGR_c15790 CDS
T00888
Name
(GenBank) putative tetracycline resistance protein
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_c15790
01504 Antimicrobial resistance genes [BR:
rhi01504
]
NGR_c15790
Transporters [BR:
rhi02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
NGR_c15790
Antimicrobial resistance genes [BR:
rhi01504
]
Gene variants
Tetracycline resistance genes
Transporters
NGR_c15790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_3
TRI12
MFS_4
Motif
Other DBs
NCBI-ProteinID:
ACP25345
UniProt:
C3MD26
LinkDB
All DBs
Position
1630075..1631370
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AA seq
431 aa
AA seq
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MLDRKFVRRGLFLVFLILLLDIMGIAIIVPVLPSYLQELTGANVGEAAIEGGWLLLVYSG
MQFLFAPVIGNLSDRFGRRPILLASVLTFAIDNLICALATSYWMLFVGRILAGISGASFG
TASAFIADVSDDTNRARNFGLIGIAFGTGFALGPVIGGLLGELGPRVPFYGAAALSFANF
AIGLFLLPETLQPANRRRFEWHRANPLGALKQMRNYPGIGWVGLVFFLYWLAHAVYPAVW
SFVSSYRYGWSEGQIGLSLGIFGVGGALVMAVVLPRVVSKFGERRTATLGLVFTALGMAG
YAAAWQGWMVYVVIVATALESLADPPLRSIASVHVPPSAQGELQGALTSISSITTILGPL
LFTQIFALFTSLAAGYAFSGAPYAVAACLIVASLSVFLLRVRHVGAFQVTEPTSVNGPRE
QFAPRSQAPAD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaggaaattcgtgcgacgcggcctgttcctcgtcttcttgatcctgcttctc
gacatcatgggcattgccatcatcgtccccgtgctgcccagctaccttcaggaactgacc
ggggcgaatgtcggcgaggcggctatcgagggcggctggctgctgctcgtctattcgggc
atgcagtttctatttgcgccggtgatcggcaatttgagcgaccggttcggacggcggccg
atcctgctggcctcggtcttgacgttcgcgatcgacaacctgatctgcgcgctggcgacg
agctattggatgctgtttgtcggccgcattctcgccggcatcagcggcgccagctttggc
actgcctccgccttcatcgccgacgtcagcgacgatacaaaccgtgccaggaacttcggg
ttgatcggcatcgctttcggcaccggcttcgcgctcggtcctgtgatcggcggccttctt
ggcgagttgggtccacgcgtcccattttacggcgcggccgcgctctccttcgccaacttc
gcgatcggcctgttccttctccccgagacgcttcaaccggcaaatcggcgccgcttcgag
tggcatcgggcaaacccgctcggcgcgctgaagcagatgcgcaactatcccggaatcggc
tgggtgggtctcgtcttcttcctctactggctcgcccatgccgtctatccggcggtctgg
tccttcgtttcgtcctatcgctacggctggagcgaggggcagatcggattgtcactcggc
attttcggcgttggcggagcgctggtgatggcggtcgtcctgccgcgtgtcgtgtcgaaa
ttcggtgagcgaaggacggcgacgctcggtctcgtctttacggcgcttggcatggccggc
tacgcggctgcctggcagggctggatggtttatgtcgtgatcgtcgcgacggcgctcgaa
agtctcgccgatccgccattgcgcagcatcgcgtcggtccacgtgccgccctcggcgcaa
ggcgaactgcagggagctcttaccagcatttcgagtataacgacgatcctcgggccgctt
ctgttcacgcagattttcgccctcttcacgagcctggcagccggttacgcgttctccggc
gcgccttacgcggtggcggcgtgcctgatcgtcgcaagcctgtccgtattcctgctgcga
gtgcggcacgtcggcgcatttcaggtcaccgagccgacttcggtgaacggtcctcgggaa
cagtttgcgccacgatcgcaagcgccggcggattga
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