Sinorhizobium fredii NGR234: NGR_c29040
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Entry
NGR_c29040 CDS
T00888
Symbol
soxB1
Name
(GenBank) sarcosine oxidase, beta subunit
KO
K00303
sarcosine oxidase, subunit beta [EC:
1.5.3.24
1.5.3.1
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00260
Glycine, serine and threonine metabolism
rhi01100
Metabolic pathways
Module
rhi_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NGR_c29040 (soxB1)
Enzymes [BR:
rhi01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
NGR_c29040 (soxB1)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
NGR_c29040 (soxB1)
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GFIT
Motif
Pfam:
DAO
Thi4
Pyr_redox_3
NAD_binding_8
Trp_halogenase
FAD_oxidored
FAD_binding_2
Pyr_redox_2
FAD_binding_3
Pyr_redox
HI0933_like
Rhodanese
MCRA
Motif
Other DBs
NCBI-ProteinID:
ACP26648
UniProt:
C3MIT5
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Position
complement(3046197..3047450)
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AA seq
417 aa
AA seq
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MRKYSVFAVAREALRGHKGWGPHWASPEPRPQYDVIIIGGGGHGLGAAYYLAKEHGITNV
AVLEKGWIGGGNTGRNTTIIRSNYLYEESMDIYEHSLKLWENLSQDLNYNVMYSPRGVMM
LSHNIHDQQSFKRHINANRLYGIDNEWLTPEQAKAYCPPLDIAKSARYPINGAALQRRGG
TARHDAVAWGYARAASDRGVHIIQNCEVTGIRRDETGRVTGVDTNRGFIGAKKVGISAAG
HSSVLMQMADVRVPLQSQPLQALVSEPLKPIFPCVVMSNSVHAYISQSDKGEFVIGAGTD
QYNSYSQTGGLQIITHTLDAICELFPMFRRVKMMRQWGGIVDVTQDRSPIQGVTPVPGLY
LNAGWGTGGFKATPGSANLFAHLIARGEPHRLSAGLTLERFRTGRLIDEAAAAAVAH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaatattctgttttcgccgtggcgcgcgaggcattgcggggccacaagggctgg
ggcccccactgggcctcgccggaaccacgcccgcaatatgatgtgatcatcatcggcggt
ggcgggcatggccttggggcggcctattatcttgccaaggagcacggcatcaccaatgtc
gccgtgctcgagaagggctggatcggcggcggcaataccggccgcaacacgacgatcatc
cggtccaactatctctatgaagagagcatggacatctacgagcattcgttgaagctctgg
gagaacctgtcgcaggacctcaactacaacgtcatgtactcgccgcgcggcgtcatgatg
ctgtcgcacaacatccacgaccagcagtccttcaagcggcacatcaatgccaaccggctc
tacggcatcgacaacgaatggctgacgccggaacaggcaaaagcctattgtccgccgctc
gatatcgccaagagcgcccgctacccgatcaacggtgcggcactgcagcggcgcggcggc
acggcgcgccacgacgccgttgcctggggctatgcccgcgcggcgtccgaccgcggcgtg
cacatcattcagaactgtgaagtgaccggcatccgccgcgacgaaaccggccgggtcacc
ggcgtcgacaccaatcgcggcttcatcggcgcgaagaaggtcggcatttccgcggccggc
catagctccgtgctgatgcagatggcggacgtgcgcgtgccgctgcagagccagccgctg
caggccctggtctccgaacccttgaagccgatcttcccctgcgtggtgatgtcgaactcg
gtgcatgcctatatctcgcagtcggacaagggcgagttcgtcatcggcgccggtaccgac
cagtacaattcctattcgcagaccggcggcctgcagatcatcacccatacgctcgacgcg
atctgcgagctcttcccgatgttccgccgcgtcaagatgatgcggcaatggggcggcatc
gtcgacgtgacgcaggatcgctcgccgatccagggcgtgacgccggtccccggcctctat
ctcaatgccggctgggggacgggcggcttcaaggcgacgccgggctcggccaatctcttt
gcccatctcatcgcgcgcggggagccgcacaggctctctgcggggctgacgctcgagcgc
ttccgcaccgggcggctcatcgacgaggcggcagctgccgccgtagcgcactag
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