Rhizobium sp. Kim5: Kim5_CH00953
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Entry
Kim5_CH00953 CDS
T05501
Symbol
rsmD
Name
(GenBank) rRNA methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhk03009
]
Kim5_CH00953 (rsmD)
Enzymes [BR:
rhk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
Kim5_CH00953 (rsmD)
Ribosome biogenesis [BR:
rhk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Kim5_CH00953 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
UPF0020
MethyltransfD12
MTS
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
ARQ57059
LinkDB
All DBs
Position
958519..959079
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AA seq
186 aa
AA seq
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MRIVGGEFRGRPLAVPKSNDIRPTADRTRESLFNILSHAYPECVDGTRILDLFAGTGAVG
LEAVSRGCRHALFVENSVEGRALLWENIDALGLHGRTRILRRDATDLGSVGNLEAFDVLF
ADPPYGKGLGEKAMAAAAQGGWLRPGAIAVLEERADIVVSVHPSYVFLENRIFGDTRVHF
FRYQPQ
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatcgtcggcggtgagtttcgcggacggcctctcgccgtgccaaagtccaacgat
atccggccgactgccgaccggacacgcgagagcctgttcaatatattgagccatgcctat
ccggaatgcgtcgacggcacccggatcctcgaccttttcgccggcaccggcgccgtcggc
ctcgaagccgtgtcgcgcggctgtcgccatgcgctcttcgtcgaaaacagcgtcgagggc
agggcgctgctttgggaaaacatcgatgcgctcggcctgcacggccgcacgcgcatcctg
cgccgcgatgccaccgatctcggcagcgtcggcaatctcgaagccttcgacgtgctgttt
gccgatccgccctatggcaagggtctcggggagaaggcgatggcggcggcggcgcaaggc
ggctggctcaggccaggcgcgatcgcggtgctcgaagaacgcgccgatattgtcgtttcc
gtgcatccttcctatgtcttcctcgaaaaccgcatctttggcgatacgagggtgcatttc
ttccggtatcagccgcaataa
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