Rhizobium sp. Kim5: Kim5_CH01085
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Entry
Kim5_CH01085 CDS
T05501
Symbol
benD
Name
(GenBank) 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
KO
K05783
dihydroxycyclohexadiene carboxylate dehydrogenase [EC:
1.3.1.25
1.3.1.-]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00362
Benzoate degradation
rhk00364
Fluorobenzoate degradation
rhk00622
Xylene degradation
rhk01100
Metabolic pathways
rhk01120
Microbial metabolism in diverse environments
rhk01220
Degradation of aromatic compounds
Module
rhk_M00551
Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Kim5_CH01085 (benD)
00364 Fluorobenzoate degradation
Kim5_CH01085 (benD)
00622 Xylene degradation
Kim5_CH01085 (benD)
Enzymes [BR:
rhk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.25 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
Kim5_CH01085 (benD)
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GFIT
Motif
Pfam:
adh_short
adh_short_C2
TRAM
Epimerase
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
ARQ57191
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All DBs
Position
complement(1096565..1097353)
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AA seq
262 aa
AA seq
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MSAPRVTGRFDGKVLVVTGAAQGIGRAVAVRAAKEGGKVLFVDRADFVAEIAAEAGAAET
AAFNADLETYDGAVSAMRFAEQRFGGIDILINNVGGAIRMRPFAEFEAQQIDAEIRRSLM
PTLYCCHAVLPHLFARGGGTIVNISSNATRGIHRVPYSAAKGGVNAITQSLAMELAERNI
RVVATAPGGTEAPARRIPRNGAGDTDAEKAWMAEVVCQVKQSSLMKRYATIEEQVAPILF
LASDEASYITGSVLPVAGGDTG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccgcgcgttaccggtcggtttgacggcaaggtgctggtcgttaccggcgcc
gcgcagggcatcggccgtgccgtggccgtccgtgccgcgaaggagggcggcaaggtgctg
ttcgtcgaccgcgccgatttcgtggcggagatcgcagccgaagccggcgccgccgaaact
gccgccttcaatgccgatctggagacctatgacggcgcggtttccgcgatgcgcttcgcc
gagcaacgcttcggcggcatcgatatcctgatcaacaatgtcggcggcgccatccgcatg
cgccccttcgcggaattcgaagcgcagcagatcgacgcggagatccgccgctcgctgatg
ccgacgctctattgctgccatgccgtcctgccgcatctcttcgcacggggcggcggcacc
atcgtcaacatatcctcgaatgcaacgcgcggcatccatcgcgtgccttattcggcggcc
aaaggcggcgtgaacgccatcacccagtcgcttgccatggaactggctgagcgcaacatc
cgcgtcgtcgccaccgcaccgggcggcacggaagcgcctgcgcgtcggattccgcgcaat
ggcgcgggcgatacggatgcggagaaggcctggatggccgaagtcgtctgccaggtgaag
caatccagtctcatgaagcggtacgcgaccatcgaggaacaggtggcgccgatcctgttc
ctcgcctcggacgaagcgtcctacatcaccggcagcgtactgcccgtggccgggggcgat
accggctga
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