Rhizobium sp. Kim5: Kim5_PA00450
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Entry
Kim5_PA00450 CDS
T05501
Symbol
nifD-2
Name
(GenBank) nitrogenase iron-molybdenum protein alpha chain NifD 2
KO
K02586
nitrogenase molybdenum-iron protein alpha chain [EC:
1.18.6.1
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00625
Chloroalkane and chloroalkene degradation
rhk00910
Nitrogen metabolism
rhk01100
Metabolic pathways
rhk01120
Microbial metabolism in diverse environments
Module
rhk_M00175
Nitrogen fixation, nitrogen => ammonia
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Kim5_PA00450 (nifD-2)
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
Kim5_PA00450 (nifD-2)
Enzymes [BR:
rhk01000
]
1. Oxidoreductases
1.18 Acting on iron-sulfur proteins as donors
1.18.6 With dinitrogen as acceptor
1.18.6.1 nitrogenase
Kim5_PA00450 (nifD-2)
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Motif
Pfam:
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
ARQ60911
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Position
pRetKim5a:complement(382895..384397)
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AA seq
500 aa
AA seq
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MSLDYENDSVLHEQLIAEVLAQYPDKAAKRRKKHLSVATSGDEPGDEPKALSECDVKSNI
KSIPGVMTIRGCAYAGSKGVVWGPVKDMVHISHGPVGCGHYSWSQRRNYYVGLTGIDTFV
TLQFTSDFQEKDIVFGGDKKLEQVIDEIEELFPLNNGISVQSECPIGLIGDDIEAVSRKK
AKEHEKTIVPVRCEGFRGVSQSLGHHIANDAIRDWVFDKNEVEFETGPYDVNVVGDYNIG
GDAWATRILLEEVGLRVVGNWSGDATLAEVERAPKAKLNLIHCYRSMNYICRHMEEKYGI
PWMEYNFFGPSQIETSLREIAKHFGPEIVDKTEAVITKYRPLVDAVVDKYRPRLEGKTVM
LYVGGLRPRHVITAYEDLGMRIVGTGYEFAHNDDYQRTGHYVNKGTLIYDDVTGYELEKF
IEGIRPDLVGSGIKEKYPVQKMGIPFRQMHSWDYSGPYHGYDGFAIFARDMDLAINNPVW
DLYDVPWKKEAAPAEAVAAE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgattacgagaatgacagcgttttgcatgaacagctcattgcggaagtatta
gcgcaatatccagacaaggcggcgaagcgccgcaagaagcacctcagcgtcgcaacgagc
ggcgacgagcctggcgatgagccgaaggccctttccgaatgcgacgtcaaatcgaacatc
aagtccattccgggcgtgatgacgatccgcggctgcgcctatgccggttccaaaggcgtg
gtatgggggccggtcaaggacatggtccacatctcgcacgggccggtcggttgcggtcat
tattcctggtcgcaacgccgcaactactacgtcggcctgacgggcatcgacacgttcgtg
acgctgcagttcacctcagacttccaggaaaaggacatcgtgttcggcggcgacaagaag
cttgaacaggtcatcgacgagatcgaggagcttttccccctcaacaacggcatcagcgtg
cagtcggaatgcccgatcgggctgattggcgacgacattgaggcggtgtcgcgcaagaag
gccaaggagcacgaaaagacgatcgtgccggtgcgctgcgagggcttccgcggcgtctcg
caatcgctcggccatcacatcgccaacgacgccatccgtgactgggttttcgacaagaac
gaagtcgagtttgagaccggcccttacgatgtcaacgtcgtcggcgactacaatatcggt
ggcgacgcgtgggctacgcgcattctattggaggaggtggggctgcgcgtggtcggcaac
tggtcgggtgatgccacgctcgctgaagtcgagcgcgcgccaaaggccaagctgaacctc
atccactgctaccgctcgatgaactacatctgtcggcacatggaggaaaaatacggcatc
ccgtggatggaatacaatttctttggtccgtcccagatcgaaacctccctgcgcgaaata
gccaagcacttcggtccggaaatcgtcgacaagaccgaggctgtcatcaccaagtaccgg
cccctggtcgatgctgtcgtcgacaagtaccggccgcgcctcgaaggcaagacggtgatg
ctctatgtcggcggcctgcgtcctcgccacgtcatcacggcctatgaggacctcggcatg
cggatcgtcggcaccggctacgagttcgcccacaacgacgactatcagcgcaccggccat
tatgtgaacaagggtacgctgatctatgacgacgtgaccggttacgagctggaaaagttc
atcgaaggcatccgccccgaccttgttgggtccggcattaaagagaagtatccggtgcag
aagatgggcatccccttccgccagatgcactcctgggattattccggcccgtatcacggc
tatgacggcttcgccatattcgcccgcgacatggatctggccatcaataatccggtgtgg
gatctctacgacgtcccctggaaaaaagaggccgcgccagctgaggcggttgcggccgaa
tga
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