Rhizobium sp. Kim5: Kim5_PB00061
Help
Entry
Kim5_PB00061 CDS
T05501
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00362
Benzoate degradation
rhk01100
Metabolic pathways
rhk01120
Microbial metabolism in diverse environments
rhk01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Kim5_PB00061 (pcaB)
Enzymes [BR:
rhk01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
Kim5_PB00061 (pcaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
Motif
Other DBs
NCBI-ProteinID:
ARQ61026
LinkDB
All DBs
Position
pRetKim5b:complement(74230..75276)
Genome browser
AA seq
348 aa
AA seq
DB search
MTASPFDHPFLSGLVGDDEIAPYFSAEADLRAMLSFEAALAKAEAAHGVLPGEAARKIAE
ACAGFSPDLASLRAATARDGVVVPDFIKQLRAAVGEEAGKSLHFGATSQDVIDTSLMIRL
KAIAFLFAGRLSAIVKGLDALERLFGGNRLMGHTRMQAAIAITAADRLAAWRAPLTTYRD
RLTEQNFPVQFGGAAGTLDELGPQAAAVRASLAQELGLTDIGQWQSTRLVIADLAGLFAS
ISGSLGKIGQDIALLAQAGDEIEMAGGGTSSAMAHKQNPVAAEVLVSLARFNATALSGIH
QSLVHEQERSGAAWTLEWLLLPQMTMATAASLRLAGELAGNIKRLGSA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatcgcccttcgaccatcccttcctctccggcctcgtcggcgacgatgaaatc
gcgccttacttctccgctgaagccgatctccgcgccatgctttccttcgaggccgcgctc
gccaaagccgaagccgcacacggcgtcctgcccggcgaagcggcaagaaagatcgccgaa
gcctgcgcgggcttttctcccgatctcgccagtcttcgcgcggcaacggcgcgcgatggc
gttgtcgtccctgatttcatcaagcagctgcgcgccgcggtcggcgaggaagcgggcaag
agcctgcatttcggtgccaccagccaggatgtcatcgacaccagtctgatgatccggctg
aaggcgatcgccttcctgtttgcaggccggctttccgccatcgtcaaaggcctcgatgca
ctcgagcgcctgttcggcggcaaccggctgatggggcatacccgcatgcaggcggcgatc
gcgatcaccgccgccgaccgtctcgctgcctggcgcgcgccgctgacgacctatcgggac
cgcctgaccgagcagaatttccccgttcagttcggcggcgccgccggcaccctcgacgag
cttgggccgcaggccgcagccgtgcgcgcctcgctcgcccaggagctcggcctcaccgac
atcggccaatggcagagcacgcgccttgtgatcgccgatctcgccggcctgtttgcctcg
atctcgggcagcctcggcaagatcggccaggatatcgccctgctcgcccaagccggtgat
gagatcgaaatggcaggcggcggcacctcctcggccatggcccacaagcagaatcccgtc
gccgccgaagtcctggtctcgcttgcccgcttcaacgccacagcgctgtccggcatccac
cagtcccttgtccatgaacaggaacgctccggtgcggcctggacgctggaatggctgctg
ctgccgcaaatgaccatggcaacggctgccagcctgcggctggcgggagaattggccggc
aatatcaagcgtctgggaagcgcctga
DBGET
integrated database retrieval system
