KEGG   Rhizobium sp. Kim5: Kim5_PC00356
Entry
Kim5_PC00356      CDS       T05501                                 
Symbol
putA
Name
(GenBank) bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk00250  Alanine, aspartate and glutamate metabolism
rhk00330  Arginine and proline metabolism
rhk01100  Metabolic pathways
rhk01110  Biosynthesis of secondary metabolites
Module
rhk_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Kim5_PC00356 (putA)
   00330 Arginine and proline metabolism
    Kim5_PC00356 (putA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rhk03000]
    Kim5_PC00356 (putA)
Enzymes [BR:rhk01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     Kim5_PC00356 (putA)
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     Kim5_PC00356 (putA)
Transcription factors [BR:rhk03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    Kim5_PC00356 (putA)
SSDB
Motif
Pfam: Pro_dh Aldedh Pro_dh-DNA_bdg PRODH
Other DBs
NCBI-ProteinID: ARQ61767
LinkDB
Position
pRetKim5c:complement(375439..379146)
AA seq 1235 aa
MLNAAIDPASSKEPAGSAPFAAFAPPIRPQSELRQAITAAYRRPETECLPPLVAAARVSE
AKRYDIRSTARTLIEALRAKHKGTGVEGLVQEYSLSSQEGVALMCLAEALLRIPDTDTRD
ALIRDKIAEGNWTSHIGGGKSMFVNAATWGLVVTGKLTSTVNARSLSAALTRLIARAGEP
VIRRGVDMAMRMMGEQFVTGETIEEALKRARPLEARGFRYSYDMLGEAATTAADAERYFK
DYEKAIHAIGKASNGRGIYGGPGISIKLSALHPRYVRAQAGRVMGELLPKVKALAVLAKT
YDIGLNIDAEEADRLELSLDLLEELCFAPELAGWNGLGFVVQAYGKRCPFVLDYIIDLAR
RSGRRMMVRLVKGAYWDAEIKRAQLDGLDDYPVYTRKIYTDVAYIACARKLLGAPDAVFP
QFATHNAQTLATIYHLAGPDFAVGKYEFQCLHGMGEPLYDEVVGKEKLDRPCRIYAPVGT
HETLLAYLVRRLLENGANSSFVHRISDPNVSVEALIADPAETVAAMPVVGAPHVQIAAPK
ALYGHARANSDGLDLSNEATLTDLARALASTAESPWHALPILADGSTDGVTRDVLNPADH
RDVVGTVTELKVEEAARIVAMAAAYAPQWAAVPPAERAACLERAADIMQARIKTLMGIVM
REAGKSAANAVGEVREAIDFLRYYAEQARKTLGPSHAPLGPIVCISPWNFPLAIFTGQVA
AALVAGNPVLAKPAGVTPIIASESVKILHEAGVPVGALQFVPGSGRLGAGMVGAPETAGV
MFTGSTEVARMIQAQLAERLSPSGKPIPLIAETGGQNGMIVDSSALAEQVVADVIASAFD
SAGQRCSALRVLCLQDDVADRTLAMLKGAFRELTVGRTDRLSVDVGPVINDGAKAEIDQH
IEQMRGSGCKVEQLALPASAAAGTFVPPTIIEIKSLSDLTKEVFGPVLHVYRFKRNGLDR
LIDDINASGYGLTFGLHTRLDETIAHVTSRIKAGNLYVNRNIIGAVVGVQPFGGRGLSGT
GPKAGGPLYIGRLVQRAPVPPQQDSVHTDLALRDYIVWLDKKGLTGEGEAARGYAGRSAL
GLERELTGPVGERNLYALHPRGRILLVPQTESGLYRQIAAALATGNHVAVDAGSLSKSAL
ADLPAAVASRFSWTSDWEKDGPFSGALVEGDRDRVHAVNKRIAALPGPLLLVQAATSEEL
AGDPEAYCLNWLLEEVSTSINTAAAGGNASLMAIG
NT seq 3708 nt   +upstreamnt  +downstreamnt
atgttgaacgcagcgatcgaccccgcatcctccaaagaacctgccggcagcgcgccgttc
gccgcttttgcgccgccgatccggccgcaatcggaacttcgccaggcgatcacggcagcc
tatcgccgtccggaaaccgaatgcctgccgcccctcgttgcggccgcgcgcgtttccgag
gcgaaacgctatgacatccgcagcaccgctcgcacgctgatcgaagccttgcgcgccaag
cacaagggcaccggcgtcgaagggctcgtgcaggaatattcgctctccagccaggaaggc
gtggcgctgatgtgccttgccgaagcgctgttgcgcattcccgataccgacacccgcgac
gcgctgatccgcgacaagatcgccgagggcaactggacctcccatatcggcggcggcaaa
tcgatgttcgtcaacgccgccacctggggcctcgtcgtcaccggcaagctgacgtccacg
gtcaacgcccgcagcctgtcggcagcgctgacgcggctgatcgcgcgcgccggcgagccg
gtcatccgccgcggcgtcgatatggcgatgcgcatgatgggcgagcagttcgtcaccggc
gaaacgatcgaggaggcgctgaagcgcgcccggccgctcgaagcgcgcggcttccgttat
tcctacgacatgctcggcgaggccgcgacgacggcggccgacgccgagcgttatttcaag
gattatgaaaaggcgatccacgccatcggcaaggcctcgaacggacgcggcatctatggc
ggcccgggcatctcgatcaagctttcggcgctgcatccgcgttatgtcagggcgcaggcc
ggtcgcgtaatgggagaattgctgcccaaggtcaaggcgctcgccgttctcgccaagacc
tatgatatcggcctcaatatcgacgccgaggaggccgatcggctggagctttcgctcgat
ctgctcgaggagctctgcttcgcgccggagctggcggggtggaacgggctcggcttcgtc
gtgcaggcctatggcaagcgctgccccttcgtgctcgattacatcatcgatctcgcccgc
cggtccgggcgccggatgatggtccgtctggtcaagggggcctattgggacgcagaaatc
aagcgcgctcagctggatggcctcgacgactatcccgtttatacccgcaagatctacacc
gacgtcgcctacatcgcctgcgcgcgcaagctgctcggtgcgccggatgcggttttcccg
cagttcgcgacccacaatgcgcagacgctggcgacgatctatcatctcgccggccccgat
ttcgcggtcggcaaatacgagttccagtgcctgcacggcatgggcgaaccgctctatgac
gaggtcgtcggcaaggaaaagctcgaccggccctgccgcatatatgcgccagtcggaacc
catgagacgttgctcgcctatctggtgcgccgcctgctggaaaacggcgccaattcctcc
ttcgtgcaccgcatctccgatccgaacgtttcggtcgaggcgctgatcgccgatcccgcc
gagaccgttgcggctatgcccgtcgtcggcgctcctcatgtacagatcgctgcgccgaag
gcgctctacggccatgctcgcgcgaattcggacgggctcgatctctcgaacgaggcgacg
ctgacggatctggcgcgggcgctcgcttccacggccgagagcccgtggcatgcgcttccg
atcctcgccgacggttccaccgatggggtgacgcgcgacgtccttaatcccgccgatcac
cgcgacgtcgtcggcacggtcaccgaactgaaggtggaggaggcggcccgtatcgttgcg
atggcggccgcctatgcaccgcaatgggcggccgtgccgccggccgagcgggcggcctgc
ctggagcgggcggccgacatcatgcaggcccgcatcaagaccctgatgggcatcgtcatg
cgcgaagccggcaaatcggcggccaacgccgtcggcgaagtgcgtgaggcgatcgacttc
ctgcgctattacgccgaacaggcgcgcaagaccctcgggccgtcccacgcgccgcttggg
cctatcgtctgcatcagcccgtggaatttcccgctggcgatcttcaccggacaggtggcc
gctgccctcgtggccggcaatcccgtgctggccaagcccgccggcgtgacgccgatcatc
gcctcggagagcgtcaagattctccacgaggcgggcgtgccggtcggcgctctgcaattc
gtgcccggcagcggccggctcggcgccggcatggtcggggctcctgaaaccgccggcgtc
atgtttaccggctcgaccgaggtcgcccgcatgatccaggcgcaactggccgaacggctg
tcgccgagcggcaaaccgatcccgctgatcgccgaaaccggcggtcagaacggcatgatc
gtcgattcctcggcattggccgagcaggtcgtggccgacgtcattgcctctgctttcgac
agcgccggccagcggtgctcggcgctcagggtcctgtgccttcaggacgatgtcgccgac
aggacgcttgccatgttgaagggcgccttccgtgaactgacggtcggccggaccgatcgc
ctgagcgtcgatgtcggccccgtcatcaacgacggcgccaaggccgagatcgaccagcat
atcgagcagatgcgcggctccggctgcaaggtggagcagctggcgctgcccgcaagtgct
gcggcgggcactttcgttccgccgacgatcatcgagatcaagtcgctgtcggatctgacc
aaggaggtcttcggaccggtcctgcatgtctaccgcttcaagagaaacgggctcgaccgc
ctgatcgacgacatcaatgcctcgggttacggcctcacattcggacttcacacgcggctt
gacgaaaccatcgcgcatgtgacgagccgcatcaaggccggcaacctctacgtcaaccgc
aacattatcggcgccgtcgtcggcgtccagcccttcggcggccgcggcctgtcgggaacg
ggtccgaaggcaggcggtccgctctatatcggccgcctggtgcagcgcgcgccggtgccg
ccgcaacaggattcggttcatacggaccttgcccttcgcgattacatcgtctggctcgac
aagaagggcctgacgggcgaaggggaggcggcgcgcggttatgccggccgctcggcactt
gggctcgaacgcgagctcaccggcccggtcggcgagcgcaatctttacgcgctgcatccg
cgcggccgcattctgctcgtgccgcagacggagagcgggctctatcgccagatcgccgca
gcccttgcaacgggcaatcatgtcgcggtggatgccggttccctctcgaaatcggcgctc
gccgatcttccggcggcggtcgcaagccgcttttcctggacctcggactgggaaaaggac
ggacctttctcgggcgcgctcgtcgagggcgatcgcgacagggtccacgcggtcaacaaa
aggatcgcggctttgcccggtccgcttctcctggttcaggccgccacgagcgaagagctt
gccggcgatcctgaggcctattgcctgaactggctgttggaagaggtctcgacctcgatt
aataccgccgctgccggcggcaatgccagcctgatggcgatcggctga

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