Rhizobium favelukesii: LPU83_2126
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Entry
LPU83_2126 CDS
T03046
Symbol
cobB
Name
(GenBank) cobyrinic acid a,c-diamide synthase
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl00860
Porphyrin metabolism
rhl01100
Metabolic pathways
rhl01240
Biosynthesis of cofactors
Module
rhl_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LPU83_2126 (cobB)
Enzymes [BR:
rhl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
LPU83_2126 (cobB)
6.3.5.11 cobyrinate a,c-diamide synthase
LPU83_2126 (cobB)
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Motif
Pfam:
GATase_3
CbiA
AAA_26
Fer4_NifH
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CDM57783
UniProt:
W6RGE5
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Position
2063664..2064971
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AA seq
435 aa
AA seq
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MSGLLIAAPSSGSGKTTVTLGLLRALRRRGVAIAPGKAGPDYIDPAFHAAASGVACLNFD
PWAMRPELIAANATLHRSGDRILVIEAMMGLFDGATDGKGTAADLAAMLGLSVVFVVDAS
HMSQSVAALVTGFAGFRADVRIAGVILNKVGGERHEMMLRKALDAVRMPIVAVVRRDNDI
ALPERHLGLVQAGEHQTLESFIEHAADAVSDACNFEFLLRIARQGLNRPSTANIARLPPL
GSRIAVARDVAFAFSYEHMLLGWRRRGAEISFFSPLADEAPDPAADAIYLPGGYPELHPG
RIASASNFRSKVIDAAGKGVRIYGECGGYMVLGEGLVDGAGERHQMLGLLPVVTSYEERK
RHLGYRRVKPLNAAYFEQPMTAHEFHYSAVVSEGGADRLFQVTDALGNDLGQAGLQRGQI
AGSYMHLIDLAEGAR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtttgttgattgcggccccgtcctccggatcgggcaagacgacggtgacactg
gggctcctgcgggcgcttcgaaggcgcggtgtcgcgatagcacccggcaaggcgggcccc
gactatatcgatccggcctttcatgcggcggcgagcggcgttgcctgtctcaacttcgat
ccatgggcgatgcgcccggaactgattgccgccaatgcgaccctgcatcgctccggcgac
cgcatcctcgtcatcgaggcgatgatggggctcttcgatggtgcgaccgacgggaagggg
accgcagccgatcttgccgccatgcttggtctttccgtggttttcgtcgtcgatgcctcg
catatgtcgcagtcggtggcggcactggtgactggatttgctggcttccgggccgatgtt
cgcatcgccggcgtgattctcaacaaggttgggggcgaacggcatgagatgatgcttcgc
aaagcgcttgatgcggtccgcatgccgatcgttgccgtcgtccgccgcgacaatgacatc
gcccttcccgaaaggcatctcggtctcgttcaggcgggagaacatcagacgctcgagagc
ttcatagagcatgcagccgatgccgtgtccgatgcatgcaatttcgaattcctgctgcgc
atcgcgcgtcaagggctcaatcgtccatctactgccaacatcgcccggttgccaccgctc
ggtagcaggatcgccgtggcgcgcgacgtcgcctttgctttctcatacgagcacatgctt
ctcggctggcgtcggcgcggtgccgaaatctcgttcttctcgccgcttgccgatgaggcg
ccggatcccgctgcagacgcgatctatctgccaggcggctatcccgagcttcatcccggg
cggatcgcgtctgccagcaacttcaggtcaaaggttatcgacgccgcgggcaagggcgtg
cgaatctatggggagtgcggcggatatatggttctcggcgaagggctggttgacggcgcc
ggcgagcgccatcagatgctcggcctcttgcccgtagtcaccagctacgaggagcgcaaa
cggcatctcggctatcggcgggtgaagccgttgaacgctgcctacttcgaacagccgatg
accgcgcacgagttccactattcggccgtggtttccgagggcggggccgatcgtctgttt
caggtgaccgatgcgttgggcaacgacctcgggcaagccggccttcagcgtggacagatt
gcgggatcctacatgcatctgatcgaccttgccgagggggcaagatga
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