Rhizobium sp. N1341: AMJ98_CH00573
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Entry
AMJ98_CH00573 CDS
T04420
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn00071
Fatty acid degradation
rhn00280
Valine, leucine and isoleucine degradation
rhn00310
Lysine degradation
rhn00362
Benzoate degradation
rhn00380
Tryptophan metabolism
rhn00410
beta-Alanine metabolism
rhn00640
Propanoate metabolism
rhn00650
Butanoate metabolism
rhn00907
Pinene, camphor and geraniol degradation
rhn00930
Caprolactam degradation
rhn01100
Metabolic pathways
rhn01110
Biosynthesis of secondary metabolites
rhn01120
Microbial metabolism in diverse environments
rhn01200
Carbon metabolism
rhn01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AMJ98_CH00573 (fadJ)
00650 Butanoate metabolism
AMJ98_CH00573 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
AMJ98_CH00573 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AMJ98_CH00573 (fadJ)
00310 Lysine degradation
AMJ98_CH00573 (fadJ)
00380 Tryptophan metabolism
AMJ98_CH00573 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AMJ98_CH00573 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AMJ98_CH00573 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AMJ98_CH00573 (fadJ)
00930 Caprolactam degradation
AMJ98_CH00573 (fadJ)
Enzymes [BR:
rhn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AMJ98_CH00573 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AMJ98_CH00573 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AMJ98_CH00573 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
NAD_binding_8
Pyr_redox
2-Hacid_dh_C
UDPG_MGDP_dh_N
FAD_binding_3
Pyr_redox_2
F420_oxidored
ApbA
GIDA
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ANL08296
LinkDB
All DBs
Position
581616..583832
Genome browser
AA seq
738 aa
AA seq
DB search
MSSYTNFTIETDADGIALVTWDMPGKSMNVFTAEVMEELNAIIDATTADGAVKGVVFTSG
KSSFSGGADLSMIKSMFSSYQEEKARSPEKAVQTLFGLVGRMSGLFRKLETSGKPWVSAI
NGTCMGGAFELSLACHGRVASNAKSVKIALPEVKVGIFPGAGGTQRVPRLANAQDALQMM
TTGQSLSGSRAKAMNLVHQVVEPDQLIPAAKQMIKDGLKPVAPWDEKGFKLPGGGIWTPA
SAQLWPAAPAILRRETSGNYPAALAILKCVYEGLQVPFDTGLKIEQRYFTEVLQTREAFS
MIRSLFISMQELGKGARRPAGIAKTELKHVGVVGAGFMGASIAYVTAAAGIPVTLIDRDM
EAATKGKAVSEGLVKDSIGKGRLTQDEAAALLSRIKPSADYADLANAGLVIEAVFEDRGV
KKAVIGAVEAVLPEGAIFASNTSTLPITGLAKNSRRPADFLGIHFFSPVEKMMLTEVILG
TETGDKALAVALDYVAAIKKTPIVVNDTRGFFVNRCVLRYMSESYDMLIEGVPPAMIENA
AKMAGMPVGPLALNDEVAIDLSLKILKATVADLGEKAIDPRHMELISRMVEKEGRFGRKN
SKGFYDYPPKPAKKSLWPELKDFYPQKKADEVDVAVLKQRFLVTIALEAARTVEEGIVTD
PREADVGSILGFGFAPYTGGALSYIDGMGAKAFVELAEKLAGAYGDHFKPTPLLKDMAAR
GETFYGRFDPYAKMGAAA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctacaccaatttcacgatcgaaaccgacgccgacggcatcgcgctcgtcacc
tgggacatgcccggcaaatcgatgaacgtcttcaccgccgaggtgatggaagagctcaac
gccatcatcgacgcgaccactgccgacggcgccgtcaagggtgtcgtcttcacatcaggc
aaatcctccttctccggcggcgccgatctgtcgatgatcaagtcgatgttcagctcctat
caagaggagaaggccaggagcccggagaaggcggtgcagacgctcttcggtctcgtcggc
cggatgagcggcctgttccgtaagctcgaaacctcgggcaagccctgggtgtcggcgatc
aacggcacctgcatgggcggcgcctttgaactgtcgcttgcctgccatggccgcgtcgct
tcgaatgccaagagcgtcaagatcgcgctgcccgaggtcaaggtcggtatcttccccggc
gccggcggcacccagcgcgtgccgcggctggcgaacgcccaggacgcgctgcagatgatg
acgacgggtcagtcgctgagcggctcgcgcgccaaggcgatgaacctcgtgcatcaggtg
gtcgagccggatcaactgatccccgccgccaagcagatgatcaaggatggcctgaagccg
gttgccccctgggacgagaagggcttcaagctgccgggcggcggcatctggacgccggcc
tccgcccagctctggccggccgcgccggcgatcctgcgccgggaaacatcgggcaattat
ccggcagcactcgctatcctgaaatgcgtctatgaaggcctgcaggtgccattcgatacc
gggctgaagatcgagcagcgttatttcaccgaggtgctgcagacccgcgaagccttctcg
atgatccgctcgctgttcatctccatgcaggagcttggcaagggcgcccgtcgccctgcc
ggcattgccaagaccgagctcaagcatgtcggcgtcgtcggcgccggcttcatgggcgcc
tcgattgcctatgtcacggctgctgccggcattccggtgacgctgatcgaccgcgatatg
gaagcggcgaccaagggtaaggccgtctccgaagggctcgtcaaggattctatcggtaag
ggacggcttacgcaggacgaggcggcagccctcctctcccgcatcaagccctcggccgat
tatgccgatctcgccaatgccggtctcgtcatcgaggcggtgttcgaagatcgcggggtg
aagaaagcggtcatcggggcggttgaagccgtgctgcccgaaggggcgatcttcgcctcc
aacacctcgacgctgccgatcacggggcttgcgaagaattccagacgcccagccgatttt
ctcggcattcacttcttctcgcccgtggagaagatgatgctgaccgaggtcatcctcgga
accgagaccggtgacaaggcgctggccgtcgctcttgattatgtcgccgcgatcaagaag
acgccgatcgtcgtcaacgacacccgcggcttcttcgtcaatcgctgcgtgctgcgctac
atgtcggaaagctacgacatgctgatcgaaggcgtgccgcctgccatgatcgagaatgct
gccaagatggccggcatgccggtcggtccgctggcgctcaacgacgaggtcgccatcgac
ctgtcgctgaagatcctcaaggcgaccgttgccgatctcggcgagaaggctatcgacccc
aggcacatggagttgatctcccgcatggtggaaaaggagggccgcttcggccgcaagaac
tccaagggcttctacgactatccgccgaaaccggcgaagaagtcgctctggcccgagctc
aaggacttctatccgcagaagaaggcggatgaggtcgatgtcgcggtgctgaagcagcgc
ttcctcgtcaccatcgcgctcgaagccgcccgcacggtcgaagaaggcatcgtcaccgat
ccgcgcgaagccgacgtcggctcgatcctcggcttcggcttcgcgccctataccggcggg
gcgctgagctatatcgacgggatgggcgcaaaggcttttgtggagctggcggaaaagtta
gcgggagcttacggagatcactttaagccgacaccgctgctgaaggacatggctgccagg
ggtgagacgttttacgggcggttcgatccctatgcgaagatgggggcggcggcgtaa
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