Roseburia hominis: RHOM_09955
Help
Entry
RHOM_09955 CDS
T01621
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rho
Roseburia hominis
Pathway
rho03030
DNA replication
rho03410
Base excision repair
rho03420
Nucleotide excision repair
rho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHOM_09955
03410 Base excision repair
RHOM_09955
03420 Nucleotide excision repair
RHOM_09955
03440 Homologous recombination
RHOM_09955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rho03032
]
RHOM_09955
03400 DNA repair and recombination proteins [BR:
rho03400
]
RHOM_09955
Enzymes [BR:
rho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHOM_09955
DNA replication proteins [BR:
rho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RHOM_09955
DNA repair and recombination proteins [BR:
rho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RHOM_09955
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHOM_09955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
XPG_I
HHH
Lipoprotein_Ltp
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AEN97102
UniProt:
G2SXR5
LinkDB
All DBs
Position
complement(2166290..2169067)
Genome browser
AA seq
925 aa
AA seq
DB search
MSEKLVLIDGHSILNRAFFGIPDLTNSEGLHTNAVYGFLNIMFKILEEEQPDYLTVAFDV
SEPTFRHKMFAEYKGTRKPMAAELKQQVPLMKEMLRAMGVTIVEKGGYEADDLLGTIAKR
SEAAGVEVAVVSGDRDLLQLATDHIKIRIPKTKRTGTEIEDYNAKEVLEKYQVTPTEFID
VKALMGDTSDNIPGVPGIGEKTATAIIAKYGSIENAYAHVDELKPPRASTNLKEHYDMAQ
MSKTLATIDIDADIAYKLADAHLEQVSDLYTEEAYLLCKRLEFKNLLGRFSVEAPKNTAE
EHFKKIEKAQEAEAFFASLRGKACGFYVVPQEETHDAHTEADGQMNLFGSFAMQNSGEEA
GQQETAGSCHIPDFLGLAVACGEEEICYVEASEALPCRKIRELFAGSAAASYATLDLKPQ
LKELGMLEKKCLGTISEENLFDNTIAAYLLNPIKNEYPYEDIAKDYAGLMILSRKDLIEK
LTYEKAAEKKPEEFLKCVCYMAYVAYKTREPLEKELADTGMEALFREIEMPLVFTLADME
KEGIIASGEALKEYGDKLAVRIDELERKIYEEAGEEFNINSPKQLGVILFEKLSLPNGKK
TKTGYSTAADVLDRLAPDYPIVADILEYRQLTKLKSTYADGLVNYIAEDGRIHTSFNQTI
TATGRLSSTEPNLQNIPMRIELGRLIRKAFLPKSGFVFVDADYSQIELRVLAHLSGDEKL
IEAYRNAQDIHRTTASQVFHIPFDEVTDLQRRNAKAVNFGIVYGISSFGLSQDLSITKKE
AAEYIERYFETYPKIKGYLDGLVAEAKEKGYVTTMFGRRRPIPELSSSNFMQRSFGERIA
MNSPIQGTAADIIKIAMNRVHDRLLAEGLKSRLILTVHDELLVETAVEEEQEVRKILAEE
MHGAAQLSVMLEIDVHAGSDWYQAK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaagctggtattgattgacggacacagtattttgaaccgggcatttttcgga
atcccggatctgaccaattccgagggacttcacacgaacgcggtatacggatttttaaat
atcatgttcaagatactggaggaggagcagcccgattacctgacggttgcgttcgacgtg
tctgagccgacgtttcgccacaagatgtttgcggaatacaagggtacccgcaagccgatg
gcggcagagttaaagcagcaggtacccctgatgaaagagatgctgcgcgcgatgggtgtg
accatcgttgaaaaaggcggttacgaggcggatgatctgcttggaaccatcgcaaagcgc
agtgaggcggcaggcgtggaggttgcggtcgtatccggtgaccgtgatcttctgcagctt
gcaacagatcatatcaagatccggatcccgaagacgaagaggacgggaaccgagattgag
gactacaacgcgaaggaagtcctcgagaagtatcaggtgacgccgacggagtttattgat
gtgaaggcactgatgggtgatacttccgacaacattccgggagttcccggcattggcgag
aagacagcgacggcgatcatcgcaaaatacggcagtattgagaatgcctacgcacatgtg
gatgaattaaagccgccgagagcaagcacgaatttaaaagagcattatgatatggcgcag
atgagcaagacgctggcgacgatcgatatcgatgcggacattgcctacaagcttgcggac
gcgcatttagaacaggtttccgatctgtatacagaggaagcctatttgttgtgtaagaga
ctggaatttaagaatctcctcggcagattctccgtggaagcaccgaagaatacggcggag
gagcattttaagaagatagaaaaggcgcaggaggcagaagcattttttgcatccctgcgt
ggaaaagcatgtggattctatgtggtgccacaggaggaaacgcatgacgcccacacggag
gctgacggtcagatgaatctgtttggcagctttgcgatgcagaactccggcgaagaggcg
gggcagcaggagacggcaggaagctgtcatatcccggattttctcggacttgcagttgca
tgtggtgaggaggaaatctgttacgtggaggcatcggaagcacttccctgccgtaagatc
cgtgaattgtttgcggggagcgcagccgcttcctatgcgacacttgacttaaagccgcag
ttaaaggaactggggatgcttgagaaaaaatgtcttggaacgatctcggaggagaacctg
ttcgacaacacgatcgcggcctaccttttaaacccgattaagaatgaatatccgtatgag
gacattgccaaggattatgcgggactgatgattctgtcgagaaaggatctcatagagaag
ctcacgtatgagaaggcggctgagaaaaagccggaggaatttttaaagtgcgtctgctat
atggcatacgtggcatacaagaccagggagccgcttgaaaaagagcttgcggacaccgga
atggaagcgctgtttcgcgagatcgagatgccgcttgtcttcacgctggcagatatggaa
aaagagggaatcattgcgtccggggaggcgctaaaggagtacggagacaagcttgccgtg
cgcattgacgaactcgagcgtaagatctatgaggaagccggggaggaattcaatatcaat
tctcccaagcagctcggtgtgattttatttgaaaagctttccctgccgaacggcaagaag
acgaagaccggttattcgacggcggcggatgttttggaccgtctggcgccggattacccg
attgtggcggatattctggagtacagacagctgaccaagctaaagtccacctatgcggac
ggtctggtgaactatatcgcagaggacggaagaatccacacgtccttcaatcagaccatc
acggcgacgggacgccttagcagcacggagccgaacctccagaacatcccgatgcggatt
gaactgggaagactgatccgcaaggcatttttgccaaagagcggttttgtgtttgtggac
gcggattattcccagatcgagctgcgcgtgctggcgcatctgtccggggatgagaagctc
atcgaggcataccggaatgcacaggatattcaccggacgacggcgtcgcaggtattccat
atcccgtttgacgaggtgaccgatctgcagcgccgcaatgccaaggcggtcaatttcggt
atcgtctacggaatcagctccttcggactcagccaggatctctccatcacgaagaaagag
gcggcggagtacattgagcgctattttgagacctatccgaagatcaaggggtatctggac
ggactggtggcggaggcaaaggaaaaaggctatgtcacgacgatgttcggaagaagacgt
ccgattccggagctttcttcgagcaattttatgcagcgttcgttcggggagcgcattgcg
atgaattccccgatacagggaacggcggcggacattatcaagatcgccatgaaccgggtg
catgaccgcctgctggcggaggggttaaaatcccggctgattctgacggtgcacgatgaa
ctgctggtggagacagcggtagaggaagagcaggaagtgcgtaagattcttgccgaagag
atgcacggggcagcacagttgtcggtgatgcttgagattgatgtgcatgcgggaagtgac
tggtatcaggcaaaatag
DBGET
integrated database retrieval system
